Gene Ava_2275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2275 
Symbol 
ID3678942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2830181 
End bp2830630 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content37% 
IMG OID637717620 
ProductNUDIX hydrolase 
Protein accessionYP_322788 
Protein GI75908492 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.961182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGAA AAGTCAGCAA AGAATTAAAC CAGTCTGGGG TAATTCCTTA TAGAGAAAGA 
AATGGAAAAA TTGAAATATT ATTGATTACG ACACGCGATC GCCAGAGTTG GGTAATTCCC
AAAGGTGGAA TCGTTAACGG CATGACTCCC CCTGATTCAG CAGCTAAAGA GGCCTGGGAA
GAAGCAGGTG TCATCGGGCA AGTAGATGTT AATGAACTGG GTACTTATAA ATATCGTAAA
CGAGGCAAAG TTTACCGAGT TAAAATGTAT TTATTACCAG TCGAAATGAT AAGTAATAAT
TATCCAGAAG CCAATAAAAG ATATCGACGT TGGCTAGATG CCAATCAAGC TATTAAACTT
ATTAAAAAAG ATTCTCTCAA GCGTATTCTA AAAGGATTTA TCCAAACCAA ATCTCATGCT
TGTTCCTCAT CTCTTGAATT CAGTCAATAG
 
Protein sequence
MRGKVSKELN QSGVIPYRER NGKIEILLIT TRDRQSWVIP KGGIVNGMTP PDSAAKEAWE 
EAGVIGQVDV NELGTYKYRK RGKVYRVKMY LLPVEMISNN YPEANKRYRR WLDANQAIKL
IKKDSLKRIL KGFIQTKSHA CSSSLEFSQ