Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2259 |
Symbol | |
ID | 3679004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2815323 |
End bp | 2816603 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637717604 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_322772 |
Protein GI | 75908476 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0479275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATACCA TCGCCATCCC CGCTCTGAAT CGTCCTGTGG ATGCCACAGT AGAGATTCCG GGTTCCAAAA GTATCACTAA TCGGGCGTTG CTTGTTGCTG CTTTAGCACA AGGCGACTCT ACTTTAGAAA ATGCCTTATT TAGTGAAGAT AGTGAATATT TTGCTAAATG TGTAGAGCAG TTGGGTATTC CCATCACACT CAATCCTCAT CTGGCGCAAA TCCAAGTTTC AGGTAAGGGA GGCGACATTC CTGCAAAACA AGCAGATTTG TTCGTGGGTT TAGCTGGTAC AGCAGCAAGA TTTATCACGG CATTAGTAGC ACTTGGTAAT GGCGAATATC GCTTAGATGG AGTTCCCCGG ATGCGAGAAC GTCCAATGGG TGACTTGGTA ACGGTGCTAC AAAACAGTGG CATAAAGATT AACTTTGAGG GCAACTCTGG TTTTATGCCC TACACTATTT ATGGTCAGCA ATTTGCAGGT GGACATTTTC GCCTCAAAGC TAACCAAACC AGTCAGCAAC TCTCCGCTTT GTTGATGATT GCACCCTACG CCCAACAAGA TACAACCATT GAGGTTGAGG GTACATTGGT TTCCCAATCT TATGTAAAAA TGACTTGTCG CCTGATGGCT GATTTTGGTG TAGATGTCAC CCAAACCGAC GACAATCAAT TTCATATCAA AGCAGGTCAG CGTTACCAAG CTCGACACTA TACTATAGAA CCAGATGCCT CAAATGCGTC TTATTTTTTC GCAGCCGCAG CCGTCACTGG TGGAAGAGTG CGGGTAAACC ATTTAACTAA ACAATCTTGC CAAGGTGATA TTTTGTGGCT GAATGTTTTA GAACAGATGG GTTGTCAGGT GCTTGAGGGT GAAGATTACA CCGAAGTGAT AGGGCCAGAA CAATTACAGG GTATCGACGT TGATATGAAT GATATGTCGG ATTTGGTGCA AACATTGGGA GCGATCGCCC CTTATGCCAA CTCACCTGTT ATCATCCGTA ATGTAGAACA TATCCGCTAC AAAGAAACCG AACGTATCCG CGCCGTTGTC ACCGAATTAC GTCGCTTAGG CGTGAAAGTT GAAGAATTTG CCGACGGGAT GAAAATTGAA CCAACCCCCA TCAACCCAGC CGCCATCGAA ACCTACCACG ACCATAGAAT GGCAATGGCT TTTGCAGTTA CAGGCTTAAA GACCCCCGGT ATTGTGATTC AAGACCCAGG TTGTACAGCC AAAACATTCC CCGACTACTT TACTCGATTC TTTAAAATGA TTGGGCAATA G
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Protein sequence | MDTIAIPALN RPVDATVEIP GSKSITNRAL LVAALAQGDS TLENALFSED SEYFAKCVEQ LGIPITLNPH LAQIQVSGKG GDIPAKQADL FVGLAGTAAR FITALVALGN GEYRLDGVPR MRERPMGDLV TVLQNSGIKI NFEGNSGFMP YTIYGQQFAG GHFRLKANQT SQQLSALLMI APYAQQDTTI EVEGTLVSQS YVKMTCRLMA DFGVDVTQTD DNQFHIKAGQ RYQARHYTIE PDASNASYFF AAAAVTGGRV RVNHLTKQSC QGDILWLNVL EQMGCQVLEG EDYTEVIGPE QLQGIDVDMN DMSDLVQTLG AIAPYANSPV IIRNVEHIRY KETERIRAVV TELRRLGVKV EEFADGMKIE PTPINPAAIE TYHDHRMAMA FAVTGLKTPG IVIQDPGCTA KTFPDYFTRF FKMIGQ
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