Gene Ava_2253 details

Gene Information

• Locus tag: Ava_2253
• Symbol: recR
• ID: 3679327
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anabaena variabilis ATCC 29413
• Kingdom: Bacteria
• Replicon accession: NC_007413
• Strand: +
• Start bp: 2804453
• End bp: 2805010
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637717595
• Product: recombination protein RecR
• Protein accession: YP_322766
• Protein GI: 75908470
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.00314078
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGCAACGCC TCCCTGGAGT TGGTCCCAAA ACAGCCCAGC GCCTAGCCTT GCATATTTTG 
AAGCGACCAG AATCTGAAGT AGAAGCTTTA GCACAAGCTC TAGTTGAGGC GAAAAAGCAG 
ATAGGCTTGT GTTCTGTCTG TTTTCACTTA TCTTCTGAAC CAGTTTGTGA AATCTGCCGC 
AATCCTAACC GTGAAAATAA TACTATCTGC GTAGTAGCAG ATTCCCGCGA TGTGATTGCC 
CTAGAGAAAA CCCGCGAATT CAAAGGTAAG TATCATGTCC TGGGTGGGGT GATTTCGCCG 
ATGGATGGAA TTGGCCCAGA ACAGTTGACC ATAACTCCTT TGTTGCGGAG GGTCAGTCAA 
CAGCAACCAA AAGAAGTGAT TTTAGCAATT AGTCCCAGCG TCGAAGGGGA AACCACAACA 
TTGTATGTTG GTCAACTATT GAAACCATTT ACTAAAGTGA CAAGAATTGC CTTTGGTTTG 
CCCGTAGGGG GAGATTTAGA ATACGCTGAT GAGATTACAC TGGCAAGAGC TTTAGAAGGA 
CGCAGAGAAT TAGATTAA 

 

Protein sequence

MQRLPGVGPK TAQRLALHIL KRPESEVEAL AQALVEAKKQ IGLCSVCFHL SSEPVCEICR 
NPNRENNTIC VVADSRDVIA LEKTREFKGK YHVLGGVISP MDGIGPEQLT ITPLLRRVSQ 
QQPKEVILAI SPSVEGETTT LYVGQLLKPF TKVTRIAFGL PVGGDLEYAD EITLARALEG 
RRELD