Gene Ava_2242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2242 
Symbol 
ID3679316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2790312 
End bp2791454 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content42% 
IMG OID637717584 
Producthistidinol-phosphate aminotransferase 
Protein accessionYP_322755 
Protein GI75908459 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCTT TTATTCGCTC AGACTTAGCC CAATTCACCG CCTATAAACC CCACCCCAGC 
AGCGATACAG ATGCAGCCGT CCCTGCTCAA TTGGATCGGT TGGATACTAA TGAAAGCCCC
TGTGATTTGC CTCCTGAGTT AAAACAAAAG CTCGCCTGGA CTTTTCAGCA GGTCATTGAA
AGCAATCGTT ATCCGGACGG CGGACATGAA GAACTTAAAG ATGCGATCGC TCAATATGTT
AACGAATCAG CTAATATTTC ATCATCACCC ATTACCGCCG CTAACATATC TGTCGGTAAT
GGTTCAGATG AATTAATCCG TTCTCTATTA ATTGCTACGT GTTTAGGCGC GCAAGGATCT
ATTCTAGTTG CTAATCCCAC CTTTTCCATG TACGGGATTT TGGCACAAAC TTTGGGTATT
CCTGTCGTGA CAGTATCAAG GAATCCCGAA AATTTTGAAA TAGACTTAAC AGCAGCTCAA
TCTGCAATTG AACAAACTCA AAATCCACCC ATTCGCGTGG TGTTCGTCGT TCATCCCAAT
TCCCCAACCG CTAATCCTTT AACTACAAAT GAGTTGAGAT GGTTAAAAAG TCTCAGTGAG
CAAATTTTAG TCGTAGTTGA CGAAGCTTAC TTCGAGTTTA GCCAAACTAC CCTAATTAGC
GAATTAGTAC AGCGTCCTAA TTGGGTAATT TTACGCACAT TTTCTAAAGC TTTCCGATTA
GCAGCCATGC GCGTGGGCTA TTGTGTCGCT CATCCAGAGG CGATCGCTAT TTTAGAAAAA
GTCCGCTTAC CTTACAATCT ACCTAGTTTT TCTATTACAT CTGCTTTAGT TGCCTTACAA
AATCGCGCCA TCTTACTAGA ATCCATTCCC CAAATACTCA ATGAGCGCGC TAAACTCATT
ACTGCTCTCT CTAAATATCC AGAATTAGCC GTTGCTGAAA GTGCAGCAAA CTTTATTTTC
TTGCAGCTTA AAACCGATAA CAAAAATTCC CCAGACACTG CTTTACTAAA TCTTCATCAA
CAACTCAAAA ACTCTGGCAC TCTAGTACGC CAGATTAGCG GTGGATTGAG AATTACAATT
GGTACACCTG AAGAAAACAT CCGCACGCTT AATCATATAC AAACGGCCTT AATAAAGGCA
TAA
 
Protein sequence
MLPFIRSDLA QFTAYKPHPS SDTDAAVPAQ LDRLDTNESP CDLPPELKQK LAWTFQQVIE 
SNRYPDGGHE ELKDAIAQYV NESANISSSP ITAANISVGN GSDELIRSLL IATCLGAQGS
ILVANPTFSM YGILAQTLGI PVVTVSRNPE NFEIDLTAAQ SAIEQTQNPP IRVVFVVHPN
SPTANPLTTN ELRWLKSLSE QILVVVDEAY FEFSQTTLIS ELVQRPNWVI LRTFSKAFRL
AAMRVGYCVA HPEAIAILEK VRLPYNLPSF SITSALVALQ NRAILLESIP QILNERAKLI
TALSKYPELA VAESAANFIF LQLKTDNKNS PDTALLNLHQ QLKNSGTLVR QISGGLRITI
GTPEENIRTL NHIQTALIKA