| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2235 |
|---|
| Symbol | |
|---|
| ID | 3679484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 2778147 |
|---|
| End bp | 2780147 |
|---|
| Gene Length | 2001 bp |
|---|
| Protein Length | 666 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637717577 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_322748 |
|---|
| Protein GI | 75908452 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0661] Predicted unusual protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00408279 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTGA AGACACTTCC CCCAAATTCC CGACCGATTG AGGGCGAACT ACAGCTAAAG
GATACACAAG CCTTGGTTGT GCGCTCATCA GGAACCGTAA GCCCTGAAAG ACCCCAGGTG
TTGGTAACTA ACAATCTCGA ACCTGAGACA ATAGTTTACG ACCCTGTAGC GGTAGCAGAG
CATTATCGTC ATCGACCACT GCAAGTTTTG CGGCGGATTT TTGCTGTTTT GGGGCCTACT
TTCTCCTTTG TCTTCGGGTT GTGGTGGGAT ACTAAACGGG GAGTAGTCGT CAAAAACGAT
CGCCGTCGAG CTATTCAGTT AAAAGAATTA TTAACGCAAC TAGGGCCTGC TTACATCAAA
ATTGGTCAAG CCTTATCTAC TAGACCAGAT TTAGTCCCCC CCATATATTT AGAAGAACTG
ACAAGGTTAC AAGACCAGTT ACCGGCTTTT CCTAACGAAA TTGCGTACCA ATTCATTCAA
GAAGAATTAG GACAGTCACC AGAAGAAGTT TACGCCGAAC TTTCAGCCCA ACCAATTGCG
GCGGCTTCTT TGGGACAAGT TTATAAAGGT AAATTAAAAA CAGGGGAAGA AGTAGCAGTT
AAAGTCCAGC GTCCAGATTT ACGAGAACGA ATCACGATTG ACTTATATAT TTTACGTGGG
CTAGCGGCTT GGGTACAAAA GAAAGTCAAG AGGGTACGCA GTGACTTAGT TGGGATTTTG
GATGAATTAG GCGATCGCAT TTTTGAAGAA ATGGATTATA TCCACGAAGG TGAAAATGCT
GAACGCTTCT TTCAACTATA CGGTCATATA CAAGACATAT ATGTGCCGAG AATATACTGG
GAATATACTA ACCGTCGTGT CTTGACGATG GAGTGGATCA ACGGCACAAA ACTCACCCAA
ACAGCAGAAA TTAGCGCCCA AGGGATAGAT GCCCGTTATT TAATCGAAGT TGGTGTACAG
TGTTCCTTAA GACAACTTTT AGAACATGGC TTCTTTCACG CTGACCCCCA TCCTGGTAAC
TTGTTAGCCA CACCAGACGG TAAACTAGCT TACCTAGACT TTGGGATGAT GAGTGAGATT
AAACCACCAC AACGTTATGG TTTAATTGAG GCGATCGTTC ATGTAGTTAA TCGTGACTTT
GAAGGGTTAG CAAAAGACTA CGTTAAATTA GATTTTCTCT CGCCAGAAAC AGACCTCACC
CCAATTATTC CCGCATTTGG CAAAGTTTTT GCCAATGCTC AAGGGGCTAG CGTAGCCGAA
TTTAACATTA AAAGCATCAC TGATGAGCTA TCAGAATTGA TGTATGAGTA TCCTTTCCGC
GTACCTCCCT ACTACGCTTT AATCATTCGC TCCCTCGTCA CCCTGGAAGG AATTGCTATC
TATATAGATC CCAACTTTAA AGTTTTGAGT GAGGCTTATC CCTACGTTGC GAAACGTTTG
TTAACCGACC CAGCACCAGA ATTAAGAATA TCCTTGCGAG ACTTACTCTT TAAAGATGGT
AGATTCCGTT GGAATCGGTT AGAAAACTTA TTACGTAATG CGCGGAAAAA CCAAGACTAC
GACTTGAACT TAGTAGTGAA TCAAGGTGTA GATTTTCTTT CGTCTGAACG TGGCTCTTTT
ATTCGAGATA AGTTGGTCGA TGAATTTCTC AACGGAATTA ATGCTTTAAG TAAAAATGTG
CTGCATAACT TTACCTACCT CCTCAGAGAA AGAGTCGGTA TCACAGCCAT CAACGAAACT
CCAGCCGCGA CAGTTGAGCA ACAACAGACC TTAGAACATA TCAAAAATAT CTTAAATATT
CTACGAGAAA CCCGTGGCTT TGACCCATCC CAGCTTGCAC CTCAAGTTGC TCAGTTGGCT
TTCAATCCAG GTGTGCAGCG TTTGGGACAG CAAGTTGCTA ATCAATTAGT GCAGAAAGCT
ACTGTGCGTC TAATTCGGGA GTTATTAACA GCAGAAGAGG TCAAGAGTAG CGAAATTGAA
TACCCTGGGA GAAGATTGTA A
|
|---|
| Protein sequence | MTVKTLPPNS RPIEGELQLK DTQALVVRSS GTVSPERPQV LVTNNLEPET IVYDPVAVAE
HYRHRPLQVL RRIFAVLGPT FSFVFGLWWD TKRGVVVKND RRRAIQLKEL LTQLGPAYIK
IGQALSTRPD LVPPIYLEEL TRLQDQLPAF PNEIAYQFIQ EELGQSPEEV YAELSAQPIA
AASLGQVYKG KLKTGEEVAV KVQRPDLRER ITIDLYILRG LAAWVQKKVK RVRSDLVGIL
DELGDRIFEE MDYIHEGENA ERFFQLYGHI QDIYVPRIYW EYTNRRVLTM EWINGTKLTQ
TAEISAQGID ARYLIEVGVQ CSLRQLLEHG FFHADPHPGN LLATPDGKLA YLDFGMMSEI
KPPQRYGLIE AIVHVVNRDF EGLAKDYVKL DFLSPETDLT PIIPAFGKVF ANAQGASVAE
FNIKSITDEL SELMYEYPFR VPPYYALIIR SLVTLEGIAI YIDPNFKVLS EAYPYVAKRL
LTDPAPELRI SLRDLLFKDG RFRWNRLENL LRNARKNQDY DLNLVVNQGV DFLSSERGSF
IRDKLVDEFL NGINALSKNV LHNFTYLLRE RVGITAINET PAATVEQQQT LEHIKNILNI
LRETRGFDPS QLAPQVAQLA FNPGVQRLGQ QVANQLVQKA TVRLIRELLT AEEVKSSEIE
YPGRRL
|
|---|
| |