Gene Ava_2234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2234 
Symbol 
ID3679483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2775932 
End bp2777869 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content46% 
IMG OID637717576 
ProductFtsH-2 peptidase 
Protein accessionYP_322747 
Protein GI75908451 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0163354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTTG AAACTGATAA AAAAAATTCA ATTAAACCAC CAAGGTTACG ACAATTTGGC 
GGCAGTTTCC TGATTCTGCT AACTTTGCTG TTATTGCTTA ACTTTATTGT TCCCAGTTTT
TCTGGCCCTC GCTTGCCACA GGTTCCTTAT AGTGACTTTA TCGCTCAAGT ACAAGCAGGT
AAAGTAGATA AGGCGATTGT AGGGGGCGAT CGCATTCAAT ACTCCATCAA AACTCAAACC
CCCGACGGTA AAGTCGTAGA CCAGGTATTT GCTACCACGC CGGTCGCTAT TGATTTAGAC
TTACCCAAAA TTCTCCGCGA AAATAATGTT GAGTTTGCCG CACCACCACC AGACCAGAAC
GGCTGGATTG GAACGCTACT AAGTTGGGTA GCACCACCAT TAATTTTCTT TGGGATTTGG
GCATTTTTAA TTAATCGTCA AGGTGGTGGC CCAGCTGCAT TGACAGTCGG GAAAAGTAAA
GCCCGGATTT ACTCAGAAGG TAGCACTGGG GTGAAATTTC TCGATGTGGC TGGGGTGGAT
GAAGCCAAGG CGGAATTAGA AGAAATTGTT GACTTCTTGA AAAATGCCAC TAAGTACACA
AATTTAGGTG CGAAAATTCC TAAGGGTGTG TTGTTAGTCG GCCCTCCTGG GACTGGTAAA
ACTTTACTAG CAAAGGCGAT CGCTGGTGAA GCGGGTGTAC CATTCTTCAG TATCTCTGGT
TCAGAATTTA TTGAGTTGTT TGTCGGTGTC GGTGCGGCGC GCGTCCGTGA CTTATTTGAG
CAAGCCAAAA AACAAGCTCC CTGTATCGTC TTCATCGATG AGTTAGACGC ATTAGGTAAA
TCTCGCGGTG GTGCTGGCGG CTTTGTTGGC GGTAACGACG AACGCGAACA AACCCTCAAC
CAATTACTCA CAGAAATGGA TGGCTTTGAT GCTAATACAG GTGTAATTAT CATCGCCGCT
ACCAACCGTC CCGAAGTTCT AGACCCTGCT TTGCGCCGTC CTGGTCGCTT TGACCGCCAA
GTCGTAGTCG ATCGCCCTGA TAAAATTGGT CGAGAAGCAA TTCTCAAAGT CCACGCCAGA
AATGTGAAAT TAGCGAATGA TGTCGATTTA GGTAACATCG CTATCAAAAC ACCTGGTTTT
GCTGGTGCAG ATTTAGCCAA TCTTGTGAAT GAAGCTGCAC TATTAGCCGC CAGACAAAAT
CGCCAAGCTG TCGTGATGGC TGATTTCAAC GAAGCTATTG AAAGGTTAGT AGCTGGCTTA
GAAAAACGTT CTCGTGTCTT GAATGAAACC GAGAAGAAGA CCGTCGCCTA TCACGAAGTT
GGTCACGCCA TTATCGGCGC ATTAATGCCG GGCGCTGGTA GAGTTGAGAA AATCTCTGTT
GTTCCTCGTG GTGTTGGCGC TTTGGGTTAT ACAATTCAAA TGCCTGAAGA AGACCGCTTC
TTGATGATTG AAGATGAAAT TCGCGGGCGA ATTGCTACTC TGTTGGGTGG ACGTTCGGCG
GAAGAAACAG TCTTTGGTAA AGTCTCCACC GGTGCAAGCG ATGACATTCA AAAAGCCACG
GACTTAGCAG AACGTTACGT CACTTTATAT GGAATGAGTG ACAAATTAGG GCCAGTAGCT
TTTGAGAAGA TTCAACAACA ATTCCTCGAA GGTTACGGTA ATCCTCGCCG TTCCATTAGT
CCCAAAGTAG CTGAGGAAAT CGACCGCGAA GTGAAGCAGA TTGTAGATAA TGCTCACCAC
ATCGCCTTGA GTATCCTGCA AAATAACCGT GACTTGTTGG AAGAAACTGC ACAGGAACTT
CTGCAAACAG AAATTCTCGA AGGTGCTGCA CTCAGGGAAC GCCTCAGCCA AGCTCAAGCA
CCAGAAGAAC TACAAGAATG GTTGCGGACA GGTAAGATAT CGGAAGATAA ACCCCTAATG
CAAACACTTC TGGTCTAA
 
Protein sequence
MPVETDKKNS IKPPRLRQFG GSFLILLTLL LLLNFIVPSF SGPRLPQVPY SDFIAQVQAG 
KVDKAIVGGD RIQYSIKTQT PDGKVVDQVF ATTPVAIDLD LPKILRENNV EFAAPPPDQN
GWIGTLLSWV APPLIFFGIW AFLINRQGGG PAALTVGKSK ARIYSEGSTG VKFLDVAGVD
EAKAELEEIV DFLKNATKYT NLGAKIPKGV LLVGPPGTGK TLLAKAIAGE AGVPFFSISG
SEFIELFVGV GAARVRDLFE QAKKQAPCIV FIDELDALGK SRGGAGGFVG GNDEREQTLN
QLLTEMDGFD ANTGVIIIAA TNRPEVLDPA LRRPGRFDRQ VVVDRPDKIG REAILKVHAR
NVKLANDVDL GNIAIKTPGF AGADLANLVN EAALLAARQN RQAVVMADFN EAIERLVAGL
EKRSRVLNET EKKTVAYHEV GHAIIGALMP GAGRVEKISV VPRGVGALGY TIQMPEEDRF
LMIEDEIRGR IATLLGGRSA EETVFGKVST GASDDIQKAT DLAERYVTLY GMSDKLGPVA
FEKIQQQFLE GYGNPRRSIS PKVAEEIDRE VKQIVDNAHH IALSILQNNR DLLEETAQEL
LQTEILEGAA LRERLSQAQA PEELQEWLRT GKISEDKPLM QTLLV