Gene Ava_2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2230 
Symbol 
ID3679479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2772484 
End bp2772999 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content41% 
IMG OID637717572 
Producthypothetical protein 
Protein accessionYP_322743 
Protein GI75908447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0711695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCA CTTCTGATTC CGCTTCAACC CGTTTTTCTC AAGCTTTCGG TATCCAAACT 
GGTGATGCTG TTGCTTCTAC CATTACTGTA TTTCAAGGTC TGAGTATAGA TGACCAGTTG
GCAGTACTAT GGTACGCTTA CACCGAAATG GGACGTTCTA TTACACCAGC CGCTACAGGC
GCTGCTCGTT TACAATTAGC TGAAGGTTTG TTAAATCAAA TCAAGCAGAT GTCTCATGCA
GAACAGTTAC AAGTCATGCG TGACTTAGCT GCAAAAAATA ATACTCAATT TTCTCGCTCT
TACGGTATCC TCAGCAATAA TACCAAGTTG GCTTTCTGGT ATGAATTATC AGAATTAATG
GTTAAAGGCT TCGTCGTACC CGTACCAACA GACTATAAAA TTTCTCGTGA TGGCTCTCAA
GTATTAGAAG CACTGAAAGG ATTAGACTTT GGTCAACAAA TCACCGTTCT CCGCAAAGTA
GTTGCTGATA TGGGTGTTGA CCCTTTAGCT GATTAA
 
Protein sequence
MTFTSDSAST RFSQAFGIQT GDAVASTITV FQGLSIDDQL AVLWYAYTEM GRSITPAATG 
AARLQLAEGL LNQIKQMSHA EQLQVMRDLA AKNNTQFSRS YGILSNNTKL AFWYELSELM
VKGFVVPVPT DYKISRDGSQ VLEALKGLDF GQQITVLRKV VADMGVDPLA D