Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2223 |
Symbol | |
ID | 3679472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2764048 |
End bp | 2765238 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637717565 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_322736 |
Protein GI | 75908440 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAAG TTAATGTTCC TAGCCTCGCT AGTTCTGCTT ATGTACATAT TCCCTTTTGC AGAAGGCGGT GCTTTTATTG TGACTTCCCG ATATTTGTTG TCGGCGATCG CCAACGTGGT GAAACATCTG TTACCATCTC CGGGTATGTG GATACTCTCT GTGAAGAAAT TGCCATTACA CCAGTTTTTG GTCAACCCCT CCAGACCATA TTTTTCGGCG GTGGTACGCC TTCGCTGTTA TCTACAGCAC AATTAGCACA AATACTAGGA ACCCTAGATA AGCGGTTTGG GATTGTGCCT GATGCAGAAA TTTCGATGGA AATTGATCCA GGTACATTTG ATCTAGCACA CATCCAAGGC TATCGTAGCG TTGGTGTGAA TCGGGTAAGT TTGGGTGTAC AAGCGTTTCA AGAAGAATTG TTAAAATTAG CTGGGCGATC GCACTCGCTT AAAGATATCT TTGCAGCTAT AGACTTGATT CACCAAGTCG AGATTCCCGA ATTTAGCATA GACTTAATCT CTGGGTTGCC GCATCAGTCT TTAGATCAAT GGCAAGATTC CCTAGAAACA GCCGTTAACA TTGCACCCAC CCATATATCT ATCTATGATT TGACAATTGA GCCAGGAACA GCCTTTGGTC GTTATTACAA ACCTGGGGAT AATCCCTTAC CTACTGATGA AACCACAGTG AAAATGTATC AGATGGGTCA GAGGATTTTG ACTGATGGCG GTTATGAACA TTATGAAATT TCCAACTACG CCAAGCCAGG ACACCAGTGT AGACATAACC GCGTGTATTG GGAAAACTGC CCTTATTACG GCTTTGGTAT GGGTGCGGCC AGCTATGTAG AAGGTAAACG CTTCACCCGT CCCCGAAAAA CAAAGGAATA TTCTCAATGG GTGCAAGAGT TGATTGCTAA TCACGGTGTG ATTGATTGGG AAATTACGCC AAAAGCAGAT GTATTGTTAG AAACGTTAAT GTTGGGGTTA CGCTTGGCTG ATGGTGTGAG TTTAGCAGCA CTAACCGAGG AATTTGGCAA GGAGAAAATA CAAGAACTGC ATCAATGTCT GCAACCTTAT TTTACTCAAG GTTGGGTACA AGTTGTGGGT GATAGGTTGC GGTTGAGTGA TCCCGATGGT TTTTTATTTT CCAATGTGGT GTTAGCCGAT TTGTTTAGTC AGTTGGGTTA A
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Protein sequence | MQKVNVPSLA SSAYVHIPFC RRRCFYCDFP IFVVGDRQRG ETSVTISGYV DTLCEEIAIT PVFGQPLQTI FFGGGTPSLL STAQLAQILG TLDKRFGIVP DAEISMEIDP GTFDLAHIQG YRSVGVNRVS LGVQAFQEEL LKLAGRSHSL KDIFAAIDLI HQVEIPEFSI DLISGLPHQS LDQWQDSLET AVNIAPTHIS IYDLTIEPGT AFGRYYKPGD NPLPTDETTV KMYQMGQRIL TDGGYEHYEI SNYAKPGHQC RHNRVYWENC PYYGFGMGAA SYVEGKRFTR PRKTKEYSQW VQELIANHGV IDWEITPKAD VLLETLMLGL RLADGVSLAA LTEEFGKEKI QELHQCLQPY FTQGWVQVVG DRLRLSDPDG FLFSNVVLAD LFSQLG
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