| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2212 |
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| Symbol | |
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| ID | 3679691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 2745162 |
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| End bp | 2748992 |
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| Gene Length | 3831 bp |
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| Protein Length | 1276 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637717554 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_322725 |
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| Protein GI | 75908429 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.524691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACTC GGCTATTTCA GTGGCTTAAA ACTTTTGACA AGCACCCTGT TGATGATCCA
CAAACTGATT ATTTCAAGGG TGTCAAGGAA CAGGTGGCAG AAGAACCACC TGAGCTAACT
AATGCGGATT TGGAACTGTT GTTTAATCAG TTGCTGCAAG GTGTGAATCA AGGGCGCGGT
CAGCAGTGGG CAATTAGGTA TTTGCAACGG ATGGAAGACC GCATTAGTGT TGAGCGCTGG
ATAGATTGGC TGTTGGTGTT TGGGGAAAAA TTACTCATGT CACCTGCACC AAATCATCAT
TTAGGTAGAC AAATGGTGAC TCTGGGTGAA CTGGGGATTG GCAAGGTAGG AGAGCTTTCT
TATGATATTG GCATCCGTTT ACTAGATAGG GAATTTATAG AAATAAATGA AGTGAATGAG
GAGATAGAAG TATCATCAAC TACAGTTTCC CAAACTAGCG ATCATCTCCC AGATTCGCCA
GGACAGGAAT TAATCCGCAA TCTCGGAGAT TTATTATGGG ACTCCACTGA ACCAGAAACA
GCTACTCACC AGACACAATC AGAAATTGAT CATCTTGATG AAGATACAAT CACCAGCTTG
CAAGAACTGA GTTGGGAATA TCACGCAGTC CCCACTGGCT CAGTTGATGA GGATACAATC
AAAAATTTGC AGGAACTGAG TTGGGAATAT CACATAACTC CCAGTGAATT AGTGGATGAT
CACATTATCG AAAATCCTCC AGAACTTAGT TGGCAAGAGC CAATAGCCCC AACTGATGTA
GTTGATGCCA CGACAAACTT ACAAGAACTA ACTTGGGAAT ATCAACAAGC CGAATTTACA
GCACCGCCTT TACTGATGCC GGCGCAAGAA GATGTCATTA GTAACTTAAG TGAACTGGTA
TTAGATTATC GAGAACAAAA CTCAGCAGCC ATAGTATCCA CCCAAAGTAA TTGGGATCAG
TCTTTAGTCA ATTTAGACCC CAATGTTGCT TACACTTTGG ATGAGTTAAT GGTGCGCTTG
GATCAAAGTA CTAATTTAGT CCAGCAATTG GCGGCTAATT TGATAGTACA GAACAACCAA
CCGCCAGCTA TTATCAATGA GCATTCTAAT GCTTTTGTCA AAGCCCAAGA ATTATTTTAC
CAAGGGTTGC AGTTAGCTAA GACTGGTGAT TTGTCAGGGG CGATCGCTAA TTATGAGCAA
GCAATTCAAT TAAACCCCAA TTCCTATGAA TACTGGTTTA ATCGTGGTTT AACTTTATTC
CATTTAGAAA GGTTTGTGGA AGCGATCGCC TCCTATGACC AAGCTATTGA AATTAAACCC
GATTACTACA AGGCTTGGTA TAATCGGGGC GGGACTTTGG GGCAGTTAGG ACTGTATGAG
GAAGCAGTGG CCTCACTCAA ACAAGCGATT ACGATTCAGC CTGATATGCC AGGGGCCTGG
TCTAGTAAGG GTTGGGCAGA ATTGAAGTTG GGACAAATTG GGGAAGCTAT TGCGAGTTAC
GATGAAGCCC TACTTTTATC ACCGGAAGAC CAAGAAAATT GGTATTACCG AGGTATTGCT
TTAGGTGTAG ATGAACAATA CGAAGCGGCC ATAGACTCCT ACGACAAAGC CTTGGAGATT
CAACCAGACT TCCATGAGGT GTGGATTGAT CGGGGTGTGG TCTTATTTAA TTTAAAACAA
TGGTCGGAAG CGATCGCCTC TTGGGATCAA GCTTTATCAA TTCAGGCAGA TTTTTACTTA
GCTTGGTATA ACCGGGGTGT AGCTTTAGAA AATTTAGGTC ATCGTGAAGA AGCGATCGCG
TCTTATAAGC AGGCGATAGC CATTAAGCCA GATTTTCACC TCGCCTGGTA TAACCAAGCT
GTAGCGCTAT TTTACTTAGA ACGATTTTTA GAAGCGATCG TTTGTTATGA CAATGCTTTA
CAAATCAAGC TGGACTACTG GGAAGCTTGG ATTGGTCGCG GGACGGCTAT CGGTAATTTA
AATGAGACGG AAACACCGCT AAATTTATTA ACTACCATAG CTGCAAATAA TTCCACCTTA
AAGCAGGCCG GCTATGAAGG TAAATTAGCT AGCTATCAGG AAGGTTTAAA ACATATCCGC
CCAGACACCC ACCCAGAAGG TTGGGGAAGA TTACATCTGG CGATCGCTAA TACTTATTAC
GAACAAGGTA AAAAATATTC TACATCCCGT AACTATTGGC GCAAAGCTGT AACCGAGTAC
AATCAAGCCC TATTAACCCT CACAAGCGCA GGTTTTCCTC AGTTACATTT AGAAGTTCTC
CAGTCTCTTG TTAAAGCATT GCTAGGACTA GGACAAACAA CACAAGCCCA AGAATTTCAG
CAACGCGGCT CCAGATTATT ACAACAACTA CTGAATGAAC CAACTCGCAC CGCAGAAATT
AAAAAACAAC TAGCACTCAA ATTTGCGGGA TTCGGACAAT TAGCCGTTGA TGTAGCTGTA
GAATATGGTG ATTTGGTAGA AGCTTGGGAA ATAGCAGAAC AGGGAAAAAA TGCTTGTTTA
ACCTGGCTGT TATGCGGCTG GAACGCAGAT ATTCAACCAC TAAATTATCG TGCAGTTCAA
CAATTACTTA ATCCCCACAC CGCAATTATT TACTGGCATA TTAGCCCAGT CGCTTTACAC
ACCTTTATTG TCAAAGACCA AGCTCCGTCA CCAATTCTTG TTTTCACACC CGTCCAAGAT
TTAGGGGCAA TTAACGCCAC ACCTCTACAA GATTTACCTC TACCCGAAGC TATGAGGCGA
CTAATTGCCT TTGAAAATTG GTTAGAAGAT TGGCAGCAAA ACTATCAAGA TTATCATCAA
CAAGCCCAAG ACCAACAAAG CAAAAGTAAT CATCCTTGGC GGTTGGAGAT GGAACACAAG
CTATTGCAGC TAAAGGAGAT TCTAGAAATT GACACCATTC AACAAGAACT TGAAGATATT
ACTCAACTGA TTTTAGTCCC TCACCGTGAT TTATTTAGAG TGCCTCTTCA TAGCTTGTTT
CAAATGTCTG AATCCTCAGA AGCAATACCA AATGCAGATA TCGCCTATCT GCCAAATATT
CAAATAGCTT TATCCGCAAA AAATGCCAAT ATTAGCCAAT TTGTCAATCA AACACTATTG
AGTGTTGAAT ATCCTGATAG TACAGCTTAC CCGACCTTGA GATTTGCTAA CCTAGAAGCC
GAAGTTGTTA GTCAGATGTT TAACAATCGT CAACGGCTCC AAGGTGGAGA AGCTACTAAA
AATAACTTTG AAGATGCTTT CTTTAGTAAT TATAATGTGT TGCATTTCAC AGGTCAGGCA
ATTAATAGGT TAACAGATCC TCAAAGATCA GAATTAGCCC TAGCAGGTGA AGATAAATTT
ACCTTGGCAG AAATCTGTGA AACAAATTTA TCAACTTATA ACTTAGTAAC TCTCTCTACT
TGTGAAACTG CAACTAATAC TAACCAAGTA ACTACCAGCG AATATGTAGA TTTAGTGAGT
GCATTTTTCT ACAAAGGTGT TTCTCAAGTC GTCAGCACTC TCTGGACTGT AGAATCATCA
GCCAGTGCTT TAGTCATCAT TGAATTTTAC CGACGACTAC AGTTAGTACA ATCAGCAAGT
ACGGCTTTAG CGGAAGCTAC AACTTGGCTA CGGGAATTAA CGGCATCAGA ACTAACACAA
TGGTATGAAA ATTTACTCAA TAACCTTGAC CCGGATGAGT TAAAGCTCAG AGCTTATTTA
GCAACACATT TGTATAGAAT TAGCAAAATG CCTGCTGATA AAAATCTATA TTCTCATCCT
TATTATTGGG CAGCTTTTAC AGTTACAGGT AAGCCGAATA CAACAAGGTA A
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| Protein sequence | MLTRLFQWLK TFDKHPVDDP QTDYFKGVKE QVAEEPPELT NADLELLFNQ LLQGVNQGRG
QQWAIRYLQR MEDRISVERW IDWLLVFGEK LLMSPAPNHH LGRQMVTLGE LGIGKVGELS
YDIGIRLLDR EFIEINEVNE EIEVSSTTVS QTSDHLPDSP GQELIRNLGD LLWDSTEPET
ATHQTQSEID HLDEDTITSL QELSWEYHAV PTGSVDEDTI KNLQELSWEY HITPSELVDD
HIIENPPELS WQEPIAPTDV VDATTNLQEL TWEYQQAEFT APPLLMPAQE DVISNLSELV
LDYREQNSAA IVSTQSNWDQ SLVNLDPNVA YTLDELMVRL DQSTNLVQQL AANLIVQNNQ
PPAIINEHSN AFVKAQELFY QGLQLAKTGD LSGAIANYEQ AIQLNPNSYE YWFNRGLTLF
HLERFVEAIA SYDQAIEIKP DYYKAWYNRG GTLGQLGLYE EAVASLKQAI TIQPDMPGAW
SSKGWAELKL GQIGEAIASY DEALLLSPED QENWYYRGIA LGVDEQYEAA IDSYDKALEI
QPDFHEVWID RGVVLFNLKQ WSEAIASWDQ ALSIQADFYL AWYNRGVALE NLGHREEAIA
SYKQAIAIKP DFHLAWYNQA VALFYLERFL EAIVCYDNAL QIKLDYWEAW IGRGTAIGNL
NETETPLNLL TTIAANNSTL KQAGYEGKLA SYQEGLKHIR PDTHPEGWGR LHLAIANTYY
EQGKKYSTSR NYWRKAVTEY NQALLTLTSA GFPQLHLEVL QSLVKALLGL GQTTQAQEFQ
QRGSRLLQQL LNEPTRTAEI KKQLALKFAG FGQLAVDVAV EYGDLVEAWE IAEQGKNACL
TWLLCGWNAD IQPLNYRAVQ QLLNPHTAII YWHISPVALH TFIVKDQAPS PILVFTPVQD
LGAINATPLQ DLPLPEAMRR LIAFENWLED WQQNYQDYHQ QAQDQQSKSN HPWRLEMEHK
LLQLKEILEI DTIQQELEDI TQLILVPHRD LFRVPLHSLF QMSESSEAIP NADIAYLPNI
QIALSAKNAN ISQFVNQTLL SVEYPDSTAY PTLRFANLEA EVVSQMFNNR QRLQGGEATK
NNFEDAFFSN YNVLHFTGQA INRLTDPQRS ELALAGEDKF TLAEICETNL STYNLVTLST
CETATNTNQV TTSEYVDLVS AFFYKGVSQV VSTLWTVESS ASALVIIEFY RRLQLVQSAS
TALAEATTWL RELTASELTQ WYENLLNNLD PDELKLRAYL ATHLYRISKM PADKNLYSHP
YYWAAFTVTG KPNTTR
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