Gene Ava_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2196 
Symbol 
ID3679752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2724972 
End bp2726903 
Gene Length1932 bp 
Protein Length643 aa 
Translation table11 
GC content38% 
IMG OID637717539 
Producthypothetical protein 
Protein accessionYP_322711 
Protein GI75908415 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTA TTACTATCCA ATGTCGATTA ATAGCCAGCG AAGCTACCCG CAGCTATCTG 
TGGCAATTGA TGGCACAGAA AAATACACCT TTGATTAACG AACTAATTGA ACAGCTAGGA
ATACATCCTG AGATAGAGCA GTGGTTGAAA AAGGGCAAGC TACCAGATGG AGTAGTCAAA
CCACTGTGCG ACTCACTCAT TACGCAAGAA TCTTTTGCTA ATCAACCCAA ACGTTTTAAT
AAATCTGCTA TTGAGGTAGT TGAGTATATT TACAAGTCAT GGCTAGCTTT ACAGAAAGAG
CGACAACAAA CAATAGATAG AAAAGAACAT TGGCTCAAGA TGCTCAAAAG CGATGTGGAA
TTGGAGCAAG AGAGTAAATG TACTTTAGAT GCTATTCGCT CTCAAGCTAC TAAAATTCTG
CCGAAATATC TTGCTCAATC CGAACAAAAT AATAATCAGA CTCAGAGTCA AAACAAGAAA
AAGAGTAAAA AAAGTAAAAC TAAAAACGAG AACTCTACAT TATTTGATAT TTTATTCAAA
GCTTATGACA AAGCGAAAAA TCCCCTTAAT CGATGCACTC TTGCGTATTT GCTCAAAAAT
AACTGTCAGG TTAGCCAAAA AGACGAAGAC CCAAATCAGT ATGCTCTACG CCGCAGTAAG
AAAGAGAAAG AAATTGAACG TCTCAAAAAA CAACTACAAT CTAGGAAACC CAATGGTCGT
GATTTGACAG GAAGAGAGTG GCAACAAACT CTCATAATGG CAACTTCATC TGTTCCTGAA
AGTAACGATG AAGCTAATAT TTGGCAGAAA CGTCTTTTAA AAAAAGATAT TTCACTCCCA
TTCCCAATTC GATTCAGAAC TAACGAAGAC CTAATTTGGT CAAAAAATGA AGAAGGACGT
ATTTGTGTTA GCTTCTCAGG TGAAGGATTG AATGATCACA TCTTTGAAAT ATACTGCGGC
AATAGACAAA TTCACTGGTT TCAAAGATTT TTAGAAGATC AGAACATCAA AAACGATAAT
AATGACCAGC ATTCATCTGC TCTGTTCACT TTACGTTCGG CAATTTTAGC GTGGCAAGAA
AATAAACAAC ATAAAGAAAA TAGCCTCCCT TGGAATACTC GTCGTTTAAC TCTTTATTGC
ACCCTTGATA CACGCTTGTG GACAACTGAC GGTACTGAGA AGGTAAAGCA AGAGAAAGTA
GACGAATTTA CTCAACAATT GGCCAACATG GAACAGAAAG AAAACCTCAA TCAGAATCAG
CAAAATTATG TCAAACGCCT GCAATCAACA TTAAATAAAC TCAACAATGC TTACCCACGT
CATAATCATG ATTTGTATCA GGGTAAACCA TCAATTCTAG TTGGTGTGAG TTTAGGTTTA
GAAAAGCCTG CAACATTAGC TATTGTGGAC AGTTCCACAA ATATAGTTCT TGCATATCGT
AGTATCAAAC AGCTACTTGG CGATAATTAC AAGTTGCTGA ACCGCCAGCG ACAGCAGCAG
CAACGTAACT CTCATGAACG CCACAAAGCT CAAAAAAGCA ATATGCCAAA TAAGTTATCA
GAATCTGATT TAGGAAAGTA CATTGATAAC TTACTAGCAC AAGCAATTAT CGCATTAGCT
AAAAATTACC AAGCTGGCAG TATTGTTCTA CCGACAATGA AAAATGTACG GGAGAGCATT
CAAAGTGAAA TAGAAGCTAG GGCAGTTAAA AGATGTCCTA ATTACAAGGA AGGTCAGCAA
CAGTATGCTA AACAGTACCG CCAGAGCATT CATCGTTGGA GTTACAACAG ATTGATGCAG
TTTATTCAGA GTCAAGCAGT TAAGGCAAAC ATTTCTATAG AGCAAGGGCC ACAACCGATT
CGAGGTAGTT CTCAAGAAAA AGCGCGAGAT TTAGCGATCG CAGCTTACTA TTTACGCCAA
AATAAATCTT AA
 
Protein sequence
MSVITIQCRL IASEATRSYL WQLMAQKNTP LINELIEQLG IHPEIEQWLK KGKLPDGVVK 
PLCDSLITQE SFANQPKRFN KSAIEVVEYI YKSWLALQKE RQQTIDRKEH WLKMLKSDVE
LEQESKCTLD AIRSQATKIL PKYLAQSEQN NNQTQSQNKK KSKKSKTKNE NSTLFDILFK
AYDKAKNPLN RCTLAYLLKN NCQVSQKDED PNQYALRRSK KEKEIERLKK QLQSRKPNGR
DLTGREWQQT LIMATSSVPE SNDEANIWQK RLLKKDISLP FPIRFRTNED LIWSKNEEGR
ICVSFSGEGL NDHIFEIYCG NRQIHWFQRF LEDQNIKNDN NDQHSSALFT LRSAILAWQE
NKQHKENSLP WNTRRLTLYC TLDTRLWTTD GTEKVKQEKV DEFTQQLANM EQKENLNQNQ
QNYVKRLQST LNKLNNAYPR HNHDLYQGKP SILVGVSLGL EKPATLAIVD SSTNIVLAYR
SIKQLLGDNY KLLNRQRQQQ QRNSHERHKA QKSNMPNKLS ESDLGKYIDN LLAQAIIALA
KNYQAGSIVL PTMKNVRESI QSEIEARAVK RCPNYKEGQQ QYAKQYRQSI HRWSYNRLMQ
FIQSQAVKAN ISIEQGPQPI RGSSQEKARD LAIAAYYLRQ NKS