| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2173 |
|---|
| Symbol | |
|---|
| ID | 3679886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 2688861 |
|---|
| End bp | 2689859 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637717516 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_322688 |
|---|
| Protein GI | 75908392 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4158] Predicted ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.269741 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAA CCTTAAGACC TGCCAACAAA AGACCAAACG AGCATCCCAA ATCACGCCAG
CGTCAATCAA TCAACAATCT TCTGCAAGTT GCAGGTATCC TACCAATCCT GGTTATCATC
TGCATTTTAT TTTCTCTCCT TAGCCCCAAC TTTCCCACAG CAGGTAACGC CGTCAACATC
TTGCGTCAGG CCTCAATCAA TATTGTGCTG GCAACCGGGA TGACATTTGT CATTCTCACC
GGCGGAATTG ACCTTTCCGT TGGGTCAATC TTGGCTGTAT CTGCGGTAGT CACAGTCTTA
GTATCCCTGC TTCCTGCATT AGGTTGGGCG GCTGTCCCGG TGGGTTTGTT GACAGGATTA
CTTTTGGGTT TACTCAATGG CGCTCTCATC ACCTTTTTAG ATGTCCCCCC CTTTATCGTC
ACCTTGGGTT CATTAACCGC CTTAAGAGGT GCTGCCTTTT TAATAGCCAA CGGCACAACA
GTTATTAATC GCAATATCAA TTTTGCTTGG ATAGGTAATA GCTATGTAGG CTTTCTTCCC
TGGCTAGTCA TCATCGCCCT ATTGACTGTA GCCGTGAGTT GGTTCGTCCT CAGACAAACT
GTTTTAGGTG TACAGATATA TGCAGTGGGT GGTAACGAAC GCGCCGCACG CTTAACAGGT
ATTAAAGTCA ATCGCGTGTT GTTATTTGTC TATGGTGTGA GTGGATTACT AGCAGGTTTA
GCCGGAATCA TGAGCGCCAG CCGTTTGTAT AGCGCCACCG GGATGTTAGG ACAAGGCTAC
GAATTAGATG CGATCGCCGC CGTAATTCTT GGTGGAACCA GCTTCACAGG CGGCATCGGC
ACCATAGGCG GCACACTCCT TGGTGCATTA ATCATCGCCG TTCTCAACAA CGGTTTGACC
CTCTTAAATA TGTCTTTCTT CTGGCAACTA GTCGTCAAAG GACTAGTCAT TATCGCCGCA
GTCATGATTG ACAGACTCCG CAGACGTTCC CGACGGTAA
|
|---|
| Protein sequence | MSQTLRPANK RPNEHPKSRQ RQSINNLLQV AGILPILVII CILFSLLSPN FPTAGNAVNI
LRQASINIVL ATGMTFVILT GGIDLSVGSI LAVSAVVTVL VSLLPALGWA AVPVGLLTGL
LLGLLNGALI TFLDVPPFIV TLGSLTALRG AAFLIANGTT VINRNINFAW IGNSYVGFLP
WLVIIALLTV AVSWFVLRQT VLGVQIYAVG GNERAARLTG IKVNRVLLFV YGVSGLLAGL
AGIMSASRLY SATGMLGQGY ELDAIAAVIL GGTSFTGGIG TIGGTLLGAL IIAVLNNGLT
LLNMSFFWQL VVKGLVIIAA VMIDRLRRRS RR
|
|---|
| |