| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2171 |
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| Symbol | |
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| ID | 3679884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2686212 |
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| End bp | 2687243 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637717514 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_322686 |
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| Protein GI | 75908390 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.982265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.26381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTGA AAAAACAGGC GATGTCTAAA GACAAGCTGC TACGCGTCTA CGCAGCAACT
TTATTAAGTA TTGTCAGTGG TACTCTTGTC AGCTGCACAA ACATTTCTCC CAATGGCCCA
ACGGCTGCTG ACACTGATAC CAATACCCAG ACCAACAATG GATCTCCCCA TAAATTGCGA
TCGGTTGGTG TTACCCTGGG GGATTTGAGT AACCCTTTCT TCGTTGTCAT GGCCCAGGGA
GCCGAGAAAG AAGCCAAGAA AATCGGTGGT GAGGATGTCA GAGTAACTGT AGTTTCTAGC
GGCTATGACC TGAACCAGCA ATTCAACCAA ATTGAGAATT TCGTTGCGGC TAATACTGAC
CTGATTATCA TCAATGCTGC TGACAGTAAA GGAATCAGAC CAGCCGTTGA CCAAGCAAGG
CAAGCAGGTA AGGTTGTAAT TGCAGTAGAT ACGGCAATAG AAGCAGACAT AGACGCTACC
GTCACCACCA ATAATGTGCA AGCGGGAGAA ATCAGTTGCC AATATATAGC CGATCGCCTC
AAAGGCAAAG GTAATGTAGT CATAGTCAAC GGGCCGCCAG TAACATCGGT AATTCAGCGA
GTGGACGGCT GCTTGAAAGT ATTAGCCAAA TATCCCGATA TCAAACTACT TTCTAAAGAC
CAGAATGCAG AAGGTAGCAG AGATGGCGGA CTCAGGGTAA TGAGTGATTT GTTAGTCACA
TTCCCCAAGA TTGATGCTGT CTTTGCCATC AACGATCCTA GCGGTGTGGG AGTAGACCTA
GCCGCCAACC AAGCCAAACG CCAAGACTTT TTCATTGTGG GAGTTGACGG TGCGCCAGAA
GCCATAGAAG CGATCGCCTC TGGAGATAGT TTATATGCAG CAACGGCAAC GCAAAACCCC
AGAGGAATGA CGCAAACAGC CATTCAGGTA GGCAACGACA TTTTACATGG CAAAAAACCT
GAATCACCCA ATATTTTGAT TCCTGCCAAG TTGATTACGA AAGAGAACGT GAGTACATCT
ACAGGCTGGT AG
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| Protein sequence | MDVKKQAMSK DKLLRVYAAT LLSIVSGTLV SCTNISPNGP TAADTDTNTQ TNNGSPHKLR
SVGVTLGDLS NPFFVVMAQG AEKEAKKIGG EDVRVTVVSS GYDLNQQFNQ IENFVAANTD
LIIINAADSK GIRPAVDQAR QAGKVVIAVD TAIEADIDAT VTTNNVQAGE ISCQYIADRL
KGKGNVVIVN GPPVTSVIQR VDGCLKVLAK YPDIKLLSKD QNAEGSRDGG LRVMSDLLVT
FPKIDAVFAI NDPSGVGVDL AANQAKRQDF FIVGVDGAPE AIEAIASGDS LYAATATQNP
RGMTQTAIQV GNDILHGKKP ESPNILIPAK LITKENVSTS TGW
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