Gene Ava_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2157 
Symbol 
ID3680104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2669903 
End bp2671369 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content45% 
IMG OID637717500 
Productarginine decarboxylase 
Protein accessionYP_322672 
Protein GI75908376 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.366245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATC AAAACCAAAC ACCATTAATC GATGGGATAA AAGCTTGTAT CGCTCGTCCT 
CATGCAGCGT TTTATACTCC TGGGCATAAG CGGGGGCGGG GGATTGCTCA ACCTTTGGCT
GATTTGTTGG GTGAAGCTGT GTTTGGTGCT GATTTGACGG AGTTGGCTAA TTTAGATAAT
TTATCTGCAC CCCAAGGAGT GATTCAGGAA GCCCAACGAT TAGCGGCGGC GGCTTTTGGT
GCTGCACAGA CATGGTTTTT AGTCAATGGT TCTACTTGCG GTGTCGAGGC AGCAATTATG
GCTACTTGTA GACCAGGGGA TAAGATTATT TTGCCTCGGA ATGTACATTC ATCGGCGATC
GCTGGTTTAA TTCTCTCTGG TGCTATCCCA ATCTTTATTC ATCCTGAATA TGACCAGGTT
TTAGATATTG CCCACAGTAT GACACCTGAG GCTGTAAAAG CTGCTTTGCA ACAACATCCT
GATGCTAAAG CGGTGTTGGC AGTTTACCCT ACATATTACG GTGTGTGTGG GGATTTAGAA
GCGATCGCCC AAATCACCCA CCAATACAAT ATTCCTCTAC TTGTAGATGA AGCCCACGGC
GCACACTTCA CTTTTCACCC AGAATTACCT ACCCCAGCCT TAGCCGCAGG TGCAGACTTA
ACTGTACAGT CCATTCACAA GGTACTGGGT GCAATGACGC AAGCTTCGAT GTTACACATC
CAAGGTGACA GAATAAATGC GGTTAGAGTT AGTCAGGCTT TGCAACTGCT ACAGTCCACT
AGCCCCAGTT ATGTACTTCT AGCTTCTCTG GATGCGGCTC GTCAACAAAT GGCTTTGTGT
GGGAAACAGT TAATGTCCCG TACCTTACAA CTAGCCAATG AAGCTAGAGA AAGAATTAGT
CAAATTCCTG GCTTATCAGT TTTACAACCT CCTACCATGA CACCATCATC AGGGTTTACA
ACTTTGGATA AAACACGCTT AACTATCACT GTTTCCGGCT TGGGTTTAAC GGGTTTTGCG
GCGGAAGAAA TTTTAGATGA ACAACTGGGG GTAACGGCTG AATTTGCCAC TTTCAAGCAT
CTCACCTTTA TTATTAGCTT GGGAAACACA ACTGCTGATA TTGAGCAGTT AGTCCAAGGT
TTCACAACTT TAGCAGAAAC AACACCGCCT GCTAAGGCAT TAGTCAACCC AAGAGTTAAT
AGTAATCTGG AATATTTTTC AGAGATTTCC CCCCGTGATG CCTTTTTTGC CGATAGTGAA
ACATTATCCA TCGAACAGGC GCGCGATCGC ATTTGTGCAG AAATTATCTG TCCTTATCCC
CCAGGAATCC CCGTTATTAT GCCAGGAGAA GTTATCACAA AACCTGCCAT TGAATATTTA
CAACACATCC AAAGTTCAGG CGGATTTATT ACTGGTTGTG CCGATACTAG TCTGAGTACT
TTAAAGGTGT TAGTCATTGG TCATTAG
 
Protein sequence
MLDQNQTPLI DGIKACIARP HAAFYTPGHK RGRGIAQPLA DLLGEAVFGA DLTELANLDN 
LSAPQGVIQE AQRLAAAAFG AAQTWFLVNG STCGVEAAIM ATCRPGDKII LPRNVHSSAI
AGLILSGAIP IFIHPEYDQV LDIAHSMTPE AVKAALQQHP DAKAVLAVYP TYYGVCGDLE
AIAQITHQYN IPLLVDEAHG AHFTFHPELP TPALAAGADL TVQSIHKVLG AMTQASMLHI
QGDRINAVRV SQALQLLQST SPSYVLLASL DAARQQMALC GKQLMSRTLQ LANEARERIS
QIPGLSVLQP PTMTPSSGFT TLDKTRLTIT VSGLGLTGFA AEEILDEQLG VTAEFATFKH
LTFIISLGNT TADIEQLVQG FTTLAETTPP AKALVNPRVN SNLEYFSEIS PRDAFFADSE
TLSIEQARDR ICAEIICPYP PGIPVIMPGE VITKPAIEYL QHIQSSGGFI TGCADTSLST
LKVLVIGH