Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2157 |
Symbol | |
ID | 3680104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2669903 |
End bp | 2671369 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637717500 |
Product | arginine decarboxylase |
Protein accession | YP_322672 |
Protein GI | 75908376 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.366245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATC AAAACCAAAC ACCATTAATC GATGGGATAA AAGCTTGTAT CGCTCGTCCT CATGCAGCGT TTTATACTCC TGGGCATAAG CGGGGGCGGG GGATTGCTCA ACCTTTGGCT GATTTGTTGG GTGAAGCTGT GTTTGGTGCT GATTTGACGG AGTTGGCTAA TTTAGATAAT TTATCTGCAC CCCAAGGAGT GATTCAGGAA GCCCAACGAT TAGCGGCGGC GGCTTTTGGT GCTGCACAGA CATGGTTTTT AGTCAATGGT TCTACTTGCG GTGTCGAGGC AGCAATTATG GCTACTTGTA GACCAGGGGA TAAGATTATT TTGCCTCGGA ATGTACATTC ATCGGCGATC GCTGGTTTAA TTCTCTCTGG TGCTATCCCA ATCTTTATTC ATCCTGAATA TGACCAGGTT TTAGATATTG CCCACAGTAT GACACCTGAG GCTGTAAAAG CTGCTTTGCA ACAACATCCT GATGCTAAAG CGGTGTTGGC AGTTTACCCT ACATATTACG GTGTGTGTGG GGATTTAGAA GCGATCGCCC AAATCACCCA CCAATACAAT ATTCCTCTAC TTGTAGATGA AGCCCACGGC GCACACTTCA CTTTTCACCC AGAATTACCT ACCCCAGCCT TAGCCGCAGG TGCAGACTTA ACTGTACAGT CCATTCACAA GGTACTGGGT GCAATGACGC AAGCTTCGAT GTTACACATC CAAGGTGACA GAATAAATGC GGTTAGAGTT AGTCAGGCTT TGCAACTGCT ACAGTCCACT AGCCCCAGTT ATGTACTTCT AGCTTCTCTG GATGCGGCTC GTCAACAAAT GGCTTTGTGT GGGAAACAGT TAATGTCCCG TACCTTACAA CTAGCCAATG AAGCTAGAGA AAGAATTAGT CAAATTCCTG GCTTATCAGT TTTACAACCT CCTACCATGA CACCATCATC AGGGTTTACA ACTTTGGATA AAACACGCTT AACTATCACT GTTTCCGGCT TGGGTTTAAC GGGTTTTGCG GCGGAAGAAA TTTTAGATGA ACAACTGGGG GTAACGGCTG AATTTGCCAC TTTCAAGCAT CTCACCTTTA TTATTAGCTT GGGAAACACA ACTGCTGATA TTGAGCAGTT AGTCCAAGGT TTCACAACTT TAGCAGAAAC AACACCGCCT GCTAAGGCAT TAGTCAACCC AAGAGTTAAT AGTAATCTGG AATATTTTTC AGAGATTTCC CCCCGTGATG CCTTTTTTGC CGATAGTGAA ACATTATCCA TCGAACAGGC GCGCGATCGC ATTTGTGCAG AAATTATCTG TCCTTATCCC CCAGGAATCC CCGTTATTAT GCCAGGAGAA GTTATCACAA AACCTGCCAT TGAATATTTA CAACACATCC AAAGTTCAGG CGGATTTATT ACTGGTTGTG CCGATACTAG TCTGAGTACT TTAAAGGTGT TAGTCATTGG TCATTAG
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Protein sequence | MLDQNQTPLI DGIKACIARP HAAFYTPGHK RGRGIAQPLA DLLGEAVFGA DLTELANLDN LSAPQGVIQE AQRLAAAAFG AAQTWFLVNG STCGVEAAIM ATCRPGDKII LPRNVHSSAI AGLILSGAIP IFIHPEYDQV LDIAHSMTPE AVKAALQQHP DAKAVLAVYP TYYGVCGDLE AIAQITHQYN IPLLVDEAHG AHFTFHPELP TPALAAGADL TVQSIHKVLG AMTQASMLHI QGDRINAVRV SQALQLLQST SPSYVLLASL DAARQQMALC GKQLMSRTLQ LANEARERIS QIPGLSVLQP PTMTPSSGFT TLDKTRLTIT VSGLGLTGFA AEEILDEQLG VTAEFATFKH LTFIISLGNT TADIEQLVQG FTTLAETTPP AKALVNPRVN SNLEYFSEIS PRDAFFADSE TLSIEQARDR ICAEIICPYP PGIPVIMPGE VITKPAIEYL QHIQSSGGFI TGCADTSLST LKVLVIGH
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