Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2138 |
Symbol | |
ID | 3680279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2644730 |
End bp | 2645812 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637717481 |
Product | photosystem II reaction centre protein PsbA/D1 |
Protein accession | YP_322653 |
Protein GI | 75908357 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01151] photosystem II, DI subunit (also called Q(B)) |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACAA CCTTACAACA GCGCAGCAGC GCTAACGTAT GGGAACGGTT CTGCACATGG ATCACCAGCA CCGAAAACCG CATTTATGTT GGTTGGTTCG GTGTGTTGAT GATTCCTACC CTGCTAGCCG CTACCGTCTG CTTCATCATC GCTTTTGTTG CTGCACCTCC AGTAGACATC GATGGTATCC GTGAACCAGT AGCAGGTTCC TTAATCTACG GAAACAACAT CATCTCAGGT GCAGTTGTTC CTTCCTCCAA CGCTATTGGC TTGCACTTCT ACCCAATCTG GGAAGCAGCT TCCTTAGATG AGTGGTTGTA CAACGGTGGT CCTTACCAGT TGGTAGTTTT CCACTTCTTG ATCGGATGCG CTTGCTACCT CGGTCGTCAG TGGGAATTGT CTTATCGCTT AGGTATGCGT CCTTGGATCT GCGTAGCTTA CTCTGCACCT TTGGCATCTG CTACAGCAGT ATTCTTGATC TACCCCATCG GACAAGGTTC CTTCTCTGAC GGTATGCCCT TGGGTATCTC CGGCACCTTC AACTTCATGA TCGTGTTCCA AGCAGAACAC AACATCTTGA TGCACCCCTT CCATATGTTG GGTGTAGCTG GTGTATTCGG TGGTTCCTTG TTCTCTGCAA TGCACGGTTC CTTGGTAACT TCCTCCTTGG TTCGTGAAAC AACCGAAGTT GAATCTCAGA ACTACGGTTA CAAATTCGGT CAAGAAGAAG AAACCTACAA CATCGTTGCA GCACACGGCT ACTTCGGTCG CTTGATCTTC CAATACGCTT CCTTCAACAA CAGCCGTCAA TTGCACTTCT TCCTAGCTGC ATGGCCTGTA ATCGGTATTT GGTTTACCGC GTTGGGTGTA AGCACAATGG CGTTCAACTT GAACGGTTTC AACTTCAACC AATCCATCAT CGACTCACAA GGTCGTGTGA TCAATACCTG GGCTGACATC ATCAACCGCG CTAACTTGGG TATGGAAGTA ATGCACGAGC GTAACGCTCA CAACTTCCCC TTAGACTTAG CTGCTGGTGA AGTTGCTCCT GTTGCTTTAA CCGCTCCTGC TATCAACGGT TAA
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Protein sequence | MTTTLQQRSS ANVWERFCTW ITSTENRIYV GWFGVLMIPT LLAATVCFII AFVAAPPVDI DGIREPVAGS LIYGNNIISG AVVPSSNAIG LHFYPIWEAA SLDEWLYNGG PYQLVVFHFL IGCACYLGRQ WELSYRLGMR PWICVAYSAP LASATAVFLI YPIGQGSFSD GMPLGISGTF NFMIVFQAEH NILMHPFHML GVAGVFGGSL FSAMHGSLVT SSLVRETTEV ESQNYGYKFG QEEETYNIVA AHGYFGRLIF QYASFNNSRQ LHFFLAAWPV IGIWFTALGV STMAFNLNGF NFNQSIIDSQ GRVINTWADI INRANLGMEV MHERNAHNFP LDLAAGEVAP VALTAPAING
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