| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2113 |
|---|
| Symbol | |
|---|
| ID | 3680371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 2614097 |
|---|
| End bp | 2615542 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637717458 |
|---|
| Product | ATP-dependent DNA helicase RecQ |
|---|
| Protein accession | YP_322630 |
|---|
| Protein GI | 75908334 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.710868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.458371 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCTC ACAAAATAAA GGCTTGGGAA GAAGTTCGGA CTACTTTTAA AGAGATTTGG
GGTTACGAAG ATTTCCGTCC GCCACAAGGG GAAATTGTTG GCAGTTTATT ATCCCGAAAA
GATGCACTAA TTATTATGCC TACCGGGGGC GGTAAATCAA TTTGTTTTCA ATTACCTGCA
CTATTACAAA CAGGTTTAAC TTTGGTAGTT TCCCCGTTGG TGGCGTTGAT GGAGAATCAA
GTGCAAGAAC TACTCCAACG CCAACAAAAA GCAGCACTAT TGCATAGTGA GTTGTCCACA
TTTCAACGCC GCATAACTCT ACAAGCATTA GAAAAACAAC AACTAAGATT ACTATATTTA
TCTCCTGAAA CTTTATTAAG TCCACCAGTT TGGGAAAGAT TATGTCAGCC ACAACTGCAA
ATAAATGGCT TAATTTTAGA TGAAGCCCAT TGTTTAGTGC AGTGGGGTGA AACATTTCGC
CCGGCTTACC GCAGACTAGG GGCTGTTAGA CCTGCATTGC TCAAACATAA ACCACCAGGA
ACTAAAATCA GTATTGCTGC GTTTACGGCT ACGGCTGACC CCTCTGCACA ACAAACTATT
CAAACAGTTT TACAATTACA GCAACCAGAT ATTTTTCGCC TCAATCCTTA CCGTCCTAAT
TTGCATCCTA CTGTCCGCAT TGCTTGGACA CCAAAGGGTA GGAAACAGCA TTTAATCAAA
TTTATTCAAA ATCGACCCCA ACAAGCAGGA TTAATTTACG TCCGCACCAG AAGAGATAGT
GAAGACTTAG CTGTATGGCT GTCACAAATG GGTTACGCCA CAGCTAGTTA TCATGCTGGA
TTAGGCGCAA CAGAACGCCG GGAAGTAGAA GCCAAGTGGT TAGGGGGAAA AATTCCCTTT
GTGGTCTGTA CCTGCGCTTT TGGAATGGGG ATTAATAAGC CAGATGTGCG CTGGGTAGTC
CATTTTCACT CACCACACCT ATTGTCTGAA TATGTGCAAG AAATTGGTCG TGGGGGAAGG
GATGGTAAAC CAGCCGAGGC GCTGACATTG GTGAGTGAAC CTACAGGGTG GCTAGATGCA
GAGGATAAAC AAAGACAGGA GTTTTTTCAA GAGAAAATGC GATCGCAACA ACAAAAAGCC
CAGCAATTAA TCAAAAAACT ACCACAGCAA GGCGAAATTA ACTCTGTAAC TAAACAATTT
CCTGATAGTG CTGTAGCCCT AGCCTTACTC CACAGCAGTG GTCAATTAAA CTGGCTAGAT
CCTTTCAATT ACAAAATAGA ACACAAGGCC AAAAGTCAGC CATCAAAACA ATTGCAGGCT
ACTAAACAAA TGACTCAATA TTTAAATACT AAACAATGTC GCTGGCAATT TTTATTAAAT
GCTTTTGGGT TTGATAAAGA AGCAAATAAC TGGCGTTGTG GACATTGCGA TAATTGCCGA
AATTAA
|
|---|
| Protein sequence | MNPHKIKAWE EVRTTFKEIW GYEDFRPPQG EIVGSLLSRK DALIIMPTGG GKSICFQLPA
LLQTGLTLVV SPLVALMENQ VQELLQRQQK AALLHSELST FQRRITLQAL EKQQLRLLYL
SPETLLSPPV WERLCQPQLQ INGLILDEAH CLVQWGETFR PAYRRLGAVR PALLKHKPPG
TKISIAAFTA TADPSAQQTI QTVLQLQQPD IFRLNPYRPN LHPTVRIAWT PKGRKQHLIK
FIQNRPQQAG LIYVRTRRDS EDLAVWLSQM GYATASYHAG LGATERREVE AKWLGGKIPF
VVCTCAFGMG INKPDVRWVV HFHSPHLLSE YVQEIGRGGR DGKPAEALTL VSEPTGWLDA
EDKQRQEFFQ EKMRSQQQKA QQLIKKLPQQ GEINSVTKQF PDSAVALALL HSSGQLNWLD
PFNYKIEHKA KSQPSKQLQA TKQMTQYLNT KQCRWQFLLN AFGFDKEANN WRCGHCDNCR
N
|
|---|
| |