Gene Ava_2110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2110 
Symbol 
ID3680368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2610897 
End bp2611418 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content35% 
IMG OID637717455 
Producthypothetical protein 
Protein accessionYP_322627 
Protein GI75908331 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.850864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.350459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCCC CAATGAATCG TCTGTCTATT TTTGTAGACG GAAACAATAT GTTCTATGCT 
CAACAAAAAA ATGGGTGGTT TTTTGATCCA AGACGGGTTT TAGAATACTT CAAAAACGAG
CAATCAGAAA CAACATTAAT TAACGCATTT TGGTACACTG GGTTAAAAGA CCCCCAAGAT
CAACGAGGTT TTCGAGATGC TCTCATTAGT TTAGGGTATA CAGTTAGGAC TAAAATACTC
AAAGAATATT ATGATGATTC GTCCGGTCGT TACTCACAAA AAGCTAATTT AGACATTGAA
ATTGTCGTTG ATATGTTTAA TACGGTAGAC CAGTACGACC GAGTAGTTCT ATTTAGTGGT
GATGGTGATT TTGAAAGAGC AATTGAATTA TTACGTTCAA AAAATACACA CATCACAGTA
GTATCGACAG AAGGAATGAT AGCTAGGGAA TTACGTAATG CTACGGATAG ATATATAGAC
TTAAATGATA TTAGAGACCG TATAGAAAAA GCAGAAGGTT AA
 
Protein sequence
MGSPMNRLSI FVDGNNMFYA QQKNGWFFDP RRVLEYFKNE QSETTLINAF WYTGLKDPQD 
QRGFRDALIS LGYTVRTKIL KEYYDDSSGR YSQKANLDIE IVVDMFNTVD QYDRVVLFSG
DGDFERAIEL LRSKNTHITV VSTEGMIARE LRNATDRYID LNDIRDRIEK AEG