Gene Ava_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2109 
Symbol 
ID3680367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2607758 
End bp2610091 
Gene Length2334 bp 
Protein Length777 aa 
Translation table11 
GC content41% 
IMG OID637717454 
ProductSerine/threonine protein kinase with Chase2 sensor 
Protein accessionYP_322626 
Protein GI75908330 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase
[COG4252] Predicted transmembrane sensor domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.312058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAG AACCTACAGA AAAAGTCAAC AAAAAAAATG GGTCTACTGC CAATATAGCG 
TCAAATAAAA CAACCAAAGC CACTTTAACA GCAGCAGCAC GCCAGTCTCA GCGTCTGGTA
CGTTTAGGAA ACATACTCAC TGTTGCTTTA ACAATGGGTG CAGCTTTGTT GACAACTTCT
GGCTTAAGTT TAGTGCAGTT GCTGGAAAAT CAAGCAATAT CTGCATTTTT TCAAATCAGA
GGACCACTTA TCCCGCCAGA GGACATAGTG ATCTTAGCAA TTGACGATCA GTCAATATCA
GTACCCGAAC AATACTATAG AACATATCCA CAGAAATATG CCTACCTAGA ACCACTGAGT
AAGTTTCCTT TTAAGCGTGT TGCCTATGCT CAGGTAGTGG AAAAATTGAT GCAGGCTGGA
GCTAAATCTG TTGCGTTGGA TGTGGTTTTT GATCTACCTG GAAGCTACGG AAATGAGGAC
GATCGCCAAC TGCAAGCAGT ATTACAGAAA TATAGCGGCA AGGTGACATT AGCGGCACAA
TACGAAACTT CTCAGTCCCA CCAGGGATTC TTTACTCAAT TGAGGTTGCC CTATGAAAAG
TTTCGTAACG ATGAGGCATC AATAGGTACA GTAAATTTTC CTGTAGAGGT GGATGGCAAA
ATACATCGCT TAGGTAGTGA ATTGACAAAG ATATTAGGCG AAGTTGATGC CCTCACGGAT
AAAATTCCAT CCTTTGACCA AGCAGTGTTG GCAACAGCAA AGGTAAAGTA TCCTCGTTCA
CCAGGAGAAC GCATTTATTT TTGGGGACCG GCTGGTACAT TTGCCACGAT TCCCTTTTGG
CACGTCCTCG ACCCGCAAAA CTGGAATACT TATTTACAGC AAGGGCAAGT ATTTCAAAAC
AAAATCGTGA TTATTGGTGC AACTGCCCAG TTAGCAAATG ATTATCACGC TGTAGCGGTT
AGTAGCGCTT GGTTATCTTC TGAAAAGATG TCAGGAGTAG AAATTCACGC CAATGCGATC
GCCACATTGA TGGAAGGTAA AGCGATCGCC CAAGGGATTC CAAGTCAATC TCTGCAAGCT
TTGTTTGTGT TGGTATTAGT TGGTGGTACA TCTTTCATCA TTACCAGAAG CAAAAGCGGA
CTTCAGCGAT TTATTTTAAG TTTGGCTGTC GCCAGTGGTT GGGGTAGTAT TAGCTATATC
AGCTTTGTTT ATGCACAGTT ACTATTTCCT ACAGCTATAC CAATGTTGGC GATCGCCTTT
TGTGGCATAT CTTATCTCGG AACAGAAGTA GCTAAAGAAA AAATCCGGAC TCGCCAAATA
GTCGATATTT TTCAGAAATA TAAAACTTCT CCTGTTGTTC AGGAAATTAT TAGCCAACAA
CAAGAACTAC AAGACTTATT ACAACAAAGA AATGTAGCCG TATCGGGAAA AATCCTCAGT
GGACGTTACA AAATTCTCAA GGTACTTGGT TACGGTGGAT TTAGTGAAAC ATATATTGCT
GAAGATACCC AGCGTCCAGG TAATCCCCAA TGTGTAGTTA AGCAACTGAA ACCAGTCAAC
ACCCAGGCAA AAGGATTGCA ACTAGCTAGG CGCTTGTTTA ATCTAGAAGC ACAAAGTTTA
GAAAAATTGG GTTCATATCA GCAAATACCC CAACTTTTGG CTTATTTTGA ACAAGAAGCA
GAATTTTATT TAGTTCAAGA ATATATTATT GGTCATCCTC TCAACCAGGA ATTGCCATCA
GGTAAAAGTA TTAGTGAAGC AGAGACGGTG GCAATTATTA GGGAAATACT GGAAATATTA
GTATTCGTTC ATGAAAATGG TGTAATTCAT CGAGATATTA AACCCAGCAA TATTATTCGC
AGACACTCAG ACCACAAATT AGTCTTAATT GACTTTGGTG CAGTCAAAGA AATTTCCTTA
CCCCAAGCAA ACAATCAAGA GCCACTCCCC TTTACTATTG GTATTGGTAC TAAAGGTTAT
GCACCCAGTG AACAATGTTT CGGCCGTCCT CAATACAATA GCGATATCTA TGCAGTCGGC
ATGATTGGTA TTAAAGCCTT AACAGGTATC GCCCCCCACG ATCTTCCCAG AGATGAGAAT
GAAGAAATAA AATGGAGAGA TAAGGCACTC GTTAGCCAGG GCTTTGCACA AATTTTGAGC
AAAATGGTGC GGGAAGATTT TAAACAGCGT TATCAGTCTG CATCAGCAGT TTTAGCAGCA
CTTAATAAAT TAGCCAATAC CCCAGATAAA AACTTCGGAC AGCAAAATGA CTCATCAATG
AACACAATCA TATCCATAGA TGAGTCAGAT TTTCCGACCG CACATTGGCC TTGA
 
Protein sequence
MAEEPTEKVN KKNGSTANIA SNKTTKATLT AAARQSQRLV RLGNILTVAL TMGAALLTTS 
GLSLVQLLEN QAISAFFQIR GPLIPPEDIV ILAIDDQSIS VPEQYYRTYP QKYAYLEPLS
KFPFKRVAYA QVVEKLMQAG AKSVALDVVF DLPGSYGNED DRQLQAVLQK YSGKVTLAAQ
YETSQSHQGF FTQLRLPYEK FRNDEASIGT VNFPVEVDGK IHRLGSELTK ILGEVDALTD
KIPSFDQAVL ATAKVKYPRS PGERIYFWGP AGTFATIPFW HVLDPQNWNT YLQQGQVFQN
KIVIIGATAQ LANDYHAVAV SSAWLSSEKM SGVEIHANAI ATLMEGKAIA QGIPSQSLQA
LFVLVLVGGT SFIITRSKSG LQRFILSLAV ASGWGSISYI SFVYAQLLFP TAIPMLAIAF
CGISYLGTEV AKEKIRTRQI VDIFQKYKTS PVVQEIISQQ QELQDLLQQR NVAVSGKILS
GRYKILKVLG YGGFSETYIA EDTQRPGNPQ CVVKQLKPVN TQAKGLQLAR RLFNLEAQSL
EKLGSYQQIP QLLAYFEQEA EFYLVQEYII GHPLNQELPS GKSISEAETV AIIREILEIL
VFVHENGVIH RDIKPSNIIR RHSDHKLVLI DFGAVKEISL PQANNQEPLP FTIGIGTKGY
APSEQCFGRP QYNSDIYAVG MIGIKALTGI APHDLPRDEN EEIKWRDKAL VSQGFAQILS
KMVREDFKQR YQSASAVLAA LNKLANTPDK NFGQQNDSSM NTIISIDESD FPTAHWP