Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2109 |
Symbol | |
ID | 3680367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2607758 |
End bp | 2610091 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637717454 |
Product | Serine/threonine protein kinase with Chase2 sensor |
Protein accession | YP_322626 |
Protein GI | 75908330 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase [COG4252] Predicted transmembrane sensor domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.312058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAG AACCTACAGA AAAAGTCAAC AAAAAAAATG GGTCTACTGC CAATATAGCG TCAAATAAAA CAACCAAAGC CACTTTAACA GCAGCAGCAC GCCAGTCTCA GCGTCTGGTA CGTTTAGGAA ACATACTCAC TGTTGCTTTA ACAATGGGTG CAGCTTTGTT GACAACTTCT GGCTTAAGTT TAGTGCAGTT GCTGGAAAAT CAAGCAATAT CTGCATTTTT TCAAATCAGA GGACCACTTA TCCCGCCAGA GGACATAGTG ATCTTAGCAA TTGACGATCA GTCAATATCA GTACCCGAAC AATACTATAG AACATATCCA CAGAAATATG CCTACCTAGA ACCACTGAGT AAGTTTCCTT TTAAGCGTGT TGCCTATGCT CAGGTAGTGG AAAAATTGAT GCAGGCTGGA GCTAAATCTG TTGCGTTGGA TGTGGTTTTT GATCTACCTG GAAGCTACGG AAATGAGGAC GATCGCCAAC TGCAAGCAGT ATTACAGAAA TATAGCGGCA AGGTGACATT AGCGGCACAA TACGAAACTT CTCAGTCCCA CCAGGGATTC TTTACTCAAT TGAGGTTGCC CTATGAAAAG TTTCGTAACG ATGAGGCATC AATAGGTACA GTAAATTTTC CTGTAGAGGT GGATGGCAAA ATACATCGCT TAGGTAGTGA ATTGACAAAG ATATTAGGCG AAGTTGATGC CCTCACGGAT AAAATTCCAT CCTTTGACCA AGCAGTGTTG GCAACAGCAA AGGTAAAGTA TCCTCGTTCA CCAGGAGAAC GCATTTATTT TTGGGGACCG GCTGGTACAT TTGCCACGAT TCCCTTTTGG CACGTCCTCG ACCCGCAAAA CTGGAATACT TATTTACAGC AAGGGCAAGT ATTTCAAAAC AAAATCGTGA TTATTGGTGC AACTGCCCAG TTAGCAAATG ATTATCACGC TGTAGCGGTT AGTAGCGCTT GGTTATCTTC TGAAAAGATG TCAGGAGTAG AAATTCACGC CAATGCGATC GCCACATTGA TGGAAGGTAA AGCGATCGCC CAAGGGATTC CAAGTCAATC TCTGCAAGCT TTGTTTGTGT TGGTATTAGT TGGTGGTACA TCTTTCATCA TTACCAGAAG CAAAAGCGGA CTTCAGCGAT TTATTTTAAG TTTGGCTGTC GCCAGTGGTT GGGGTAGTAT TAGCTATATC AGCTTTGTTT ATGCACAGTT ACTATTTCCT ACAGCTATAC CAATGTTGGC GATCGCCTTT TGTGGCATAT CTTATCTCGG AACAGAAGTA GCTAAAGAAA AAATCCGGAC TCGCCAAATA GTCGATATTT TTCAGAAATA TAAAACTTCT CCTGTTGTTC AGGAAATTAT TAGCCAACAA CAAGAACTAC AAGACTTATT ACAACAAAGA AATGTAGCCG TATCGGGAAA AATCCTCAGT GGACGTTACA AAATTCTCAA GGTACTTGGT TACGGTGGAT TTAGTGAAAC ATATATTGCT GAAGATACCC AGCGTCCAGG TAATCCCCAA TGTGTAGTTA AGCAACTGAA ACCAGTCAAC ACCCAGGCAA AAGGATTGCA ACTAGCTAGG CGCTTGTTTA ATCTAGAAGC ACAAAGTTTA GAAAAATTGG GTTCATATCA GCAAATACCC CAACTTTTGG CTTATTTTGA ACAAGAAGCA GAATTTTATT TAGTTCAAGA ATATATTATT GGTCATCCTC TCAACCAGGA ATTGCCATCA GGTAAAAGTA TTAGTGAAGC AGAGACGGTG GCAATTATTA GGGAAATACT GGAAATATTA GTATTCGTTC ATGAAAATGG TGTAATTCAT CGAGATATTA AACCCAGCAA TATTATTCGC AGACACTCAG ACCACAAATT AGTCTTAATT GACTTTGGTG CAGTCAAAGA AATTTCCTTA CCCCAAGCAA ACAATCAAGA GCCACTCCCC TTTACTATTG GTATTGGTAC TAAAGGTTAT GCACCCAGTG AACAATGTTT CGGCCGTCCT CAATACAATA GCGATATCTA TGCAGTCGGC ATGATTGGTA TTAAAGCCTT AACAGGTATC GCCCCCCACG ATCTTCCCAG AGATGAGAAT GAAGAAATAA AATGGAGAGA TAAGGCACTC GTTAGCCAGG GCTTTGCACA AATTTTGAGC AAAATGGTGC GGGAAGATTT TAAACAGCGT TATCAGTCTG CATCAGCAGT TTTAGCAGCA CTTAATAAAT TAGCCAATAC CCCAGATAAA AACTTCGGAC AGCAAAATGA CTCATCAATG AACACAATCA TATCCATAGA TGAGTCAGAT TTTCCGACCG CACATTGGCC TTGA
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Protein sequence | MAEEPTEKVN KKNGSTANIA SNKTTKATLT AAARQSQRLV RLGNILTVAL TMGAALLTTS GLSLVQLLEN QAISAFFQIR GPLIPPEDIV ILAIDDQSIS VPEQYYRTYP QKYAYLEPLS KFPFKRVAYA QVVEKLMQAG AKSVALDVVF DLPGSYGNED DRQLQAVLQK YSGKVTLAAQ YETSQSHQGF FTQLRLPYEK FRNDEASIGT VNFPVEVDGK IHRLGSELTK ILGEVDALTD KIPSFDQAVL ATAKVKYPRS PGERIYFWGP AGTFATIPFW HVLDPQNWNT YLQQGQVFQN KIVIIGATAQ LANDYHAVAV SSAWLSSEKM SGVEIHANAI ATLMEGKAIA QGIPSQSLQA LFVLVLVGGT SFIITRSKSG LQRFILSLAV ASGWGSISYI SFVYAQLLFP TAIPMLAIAF CGISYLGTEV AKEKIRTRQI VDIFQKYKTS PVVQEIISQQ QELQDLLQQR NVAVSGKILS GRYKILKVLG YGGFSETYIA EDTQRPGNPQ CVVKQLKPVN TQAKGLQLAR RLFNLEAQSL EKLGSYQQIP QLLAYFEQEA EFYLVQEYII GHPLNQELPS GKSISEAETV AIIREILEIL VFVHENGVIH RDIKPSNIIR RHSDHKLVLI DFGAVKEISL PQANNQEPLP FTIGIGTKGY APSEQCFGRP QYNSDIYAVG MIGIKALTGI APHDLPRDEN EEIKWRDKAL VSQGFAQILS KMVREDFKQR YQSASAVLAA LNKLANTPDK NFGQQNDSSM NTIISIDESD FPTAHWP
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