| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2108 |
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| Symbol | |
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| ID | 3680366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2607018 |
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| End bp | 2607737 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637717453 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_322625 |
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| Protein GI | 75908329 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.813228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.21449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTTCCCA TTAGAGATAA TAATCCTGTA ACAATTACGC CTTATGTGAC TTATGGGCTA
ATTGCTGCCA ATGTCCTCGC TTTTTTGTAT GAAGCTAGCC TTCCTCCCCA AGCATTAGAT
GGGTTTTTGC ATTTGGCTGC TGTTGTTCCG CGAGAACTGA GTTTAAGTTT TGCTGGTGTT
TCTGTGCATC AACCAGTACC AGAGTGGGCA ACTTTGATTA CTTCCCAATT TCTGCACGGT
GGCTTTCTGC ACCTAGCTGG GAATATGTTG TTCCTATGGA TTTTTGGTAA CAATGTAGAA
GAAAAACTTG GTCATGCCAG ATATTTGCTG TTTTATCTGG CTTGTGGCGT TTTAGCGTCT
TTAACCCAAT GGTACTTCTC TCAAGATTCT AGCATTCCTT CTTTGGGTGC TAGTGGGGCG
ATCGCTGGTG TGATGGGTGC ATACATCCTG CGTTTTCCCA ATGCCGAAAT TCTCGGTGTA
GTCCCTTTAG GTTTCTTCTT CCCAACTTTC CGTGTTCCTG CATACTTCTT TTTAGGTTTT
TGGTTCCTGC AACAATCTTT TTACGGACTT GCTGGTTTAC AAACGCGCAC TAACATCGGG
ATGGAAAGTG GTGGTATTGC CTACTGGGCC CATGCTGGTG GCTTTATTTT CGGCGCACTC
CTGGGGCCCT TGTTGGGTTT ATTCAGCGAT AAAGCCAAGG AAGAATCTTG GTATAGTTAA
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| Protein sequence | MVPIRDNNPV TITPYVTYGL IAANVLAFLY EASLPPQALD GFLHLAAVVP RELSLSFAGV
SVHQPVPEWA TLITSQFLHG GFLHLAGNML FLWIFGNNVE EKLGHARYLL FYLACGVLAS
LTQWYFSQDS SIPSLGASGA IAGVMGAYIL RFPNAEILGV VPLGFFFPTF RVPAYFFLGF
WFLQQSFYGL AGLQTRTNIG MESGGIAYWA HAGGFIFGAL LGPLLGLFSD KAKEESWYS
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