Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2104 |
Symbol | |
ID | 3680362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2599387 |
End bp | 2604045 |
Gene Length | 4659 bp |
Protein Length | 1552 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637717449 |
Product | WD-40 repeat-containing protein |
Protein accession | YP_322621 |
Protein GI | 75908325 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.581911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.024962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATC TACCTAATTC CCATAACTTA ACCCCTGAGA ATGAGCAGTC GTTACAAACT TTGGTCAGGG CAATTACTTT TTCCCAGGGA GAATTTTCTT TAATATTATT GCGTTGTAAT TACGCGGCTT TGCGTAAACG CATTACCCAA CAACTACACC AAATTTCTCC AATCAAAATA CATGAAATCA CTTTACCAGA AACAGTAAAA ACACTGTACA CCAACATAAA TGAACAATTA GGCGATGAAC AACCACCCGC ATTGATTGTC TTTGGCTTAG AGTCAGCTAA AGACATTGAT ACTGTGCTGA CTGCGGCTAA CCGAGTCAGA GAAGAGTTTA GGAAAAACTT TCCCTTCCCC ATACTTATCT GGGTTAATGA CCAAGTTCTC CAAAAGTTTA TTAGATTAGC TACCGATTTA GAAAATTGGG CAACTATTAT TGCATTTGAA AGTAGTACTA ATGAATTAAT TAGTTTTATT CAGAAAAAAA CTGACGAAGT TTTTATAGGT GATTTAATTC CCAATCCACA AATTTGTTGG GAATTGAATC GAGGAATTCA AGATTTACAA AACCGAGGTA GAGAATTAAA TCAAGTAATC CAAGCTAACT TGGAGTTTGT CCGGGGTTTA CATGATTATT TATACGATAA TACAGACTCT GCTTTGGCTC ATTATCAAGA TAGTTTGGAT TTTTGGCAAA AAAATCATAA TTTGAAACGG CAAGGAATAT TACTATTTAA TATTGGTTTG ACTTATGTGA GACAGGCGCA GAAGAATCAG ATAGATAATC AGGACTGTTA CCAAAAAGCT AGGAAATATC TTCAGCGATG TATTGCAATT TTAGAAAAAG GACACTTTGA TAATTTAATC GCTAAGTATA TTAATACGTT AGGAGAGGTA TTAAGAAACT TAAATGCTTG GCCAGATTTA TATAACCTAG CACATAAATC ATTGAAACTA CATAAAAATT ATGGACAATC GCTAAAAATA GCCCAATCTT ATGGATTTTT AGCTGAAGTT TCTTTAGAAA GTTTTCAATG GTATGAAGCT AAAAAACTTG CTCAAAAAGC ATTACAAAGA CTGAAGAATA TATCAAATCA AAAAGTCCCT GAACGGAGTT TATATCTATT TATTTTAGCC CGTTCTCAAA AAGAGTTAAA TGAGAATACT GATGCTATTA GTAATTTATT GGCAGCTAAA AATGAAACTT GTGCTTACTA TAATCCCAGA CTTTATATTA ATATTTTAGA GATGTTAAGT AACGTCTACT TTGAGCAAAG TCAATATTTA GCAGCTTTTC AAATTAAACA AGAGCAACTA CAAATTGAAC AACAGTATGG TTTTCGTGCT TTTGTTGGTG CATCTTATCT TAATCCCCAG CTTCAGGCGA TTAATCCTGC CCAATTACAA GTATACAGAA AGGGAACAAT TGCTCAAGAA ATAGTTGCTT CTGGTCGAGA AAAGGATGTT CAACGTTTGC GAGAAAGGAT TAGTAGCACT GAACATAAAT TGACTGTCAT TCATGGTCAA TCAGGTGTGG GTAAAAGTTC TATTTTACAA GCTGGTTTAA TACCCGCTTT GCAAGAAAAG CCGATTGCTG AACGTGATGC TTTACCTCTA TTGTTACGAG TGTATACAGA TTGGGTAGGA ACATTAGGAC AAAACTTAGC ACAAGCTGTT GAAGAAGTTA GAGGCTATAA GTTATCTCAT GATCTTAATT CAGCCCTAGC CATTAGAGAG CAATTACAGA AAAATTCTGA GCGCCATCTG TTAACAGTGT TAATTTTTGA CCAATTTGAG GAATTTTTCT TCGTTTATAC AGATAAAGCT AGCAGAAAAG CATTTTACGA GTTTTTACGC TTTTGTTTGG ATATACCTTT TGTCAAGATT GTACTTTCGT TGCGGGAAGA TTATTTACAT TACTTACTAG AGTTAGAACG ATTATTTAAT TTGGGGTCAA TTAATAATAA TATTTTAGAT AAAAATATTC GCTATTATTT GGGTAATTTT ACCCCAGCAG ATGCCAAAGC TATTATTCAA AACCTGACAG AGAAAACACA CTTTTACCTA GAACCTAAAC TCATAGATAA GCTAGTTGAA GATTTATCAT GCCAATTTGG GGAAGTGCGA CCCATTGAAT TACAGATTGT GGGGGCGCAA ATGCAAACAG AAAAAATTAA TACTCTGGCA AAATATTGTC AGTTTGGTAC TAAAGAAAAA TTAGTAGAAA GGTTTTTAGA AACAGTTATT AGAAATTGTG GTTCTGAAAA TGAACAAATG GCGCGCCTAG TACTATATTT ACTCACAGAC GAAAACGGTA CTCGTCCTCT CAAAACTCGG ACTGATTTGG CATCAGATTT AAAACCAGAG GTAAAAACAT TAGATTTAAT CTTAGAAATT TTTGTGAAAT CTGGATTAGT GTTACTTTTA CCAGAAGTAC CAGCAGATCG CTATCAATTA GTACATGATT ATTTAGTCCC GTTCATTCGT CAACAGCAGG GAAATGAGTT ATTGGCAGAA CTCGAACAGG AACGGGAACA AAGAAAACAG ATTGAACAAG AGCTAGAGCG GGTAGAAACC ATACTAACTC AAGTCAACGC AGAACTAGAA AAACAACAAA TTGTCCTCAG AGAAGTACAA GCAGGGACAA CCTTAGAACA GGAAGGAGTC AGCGCTTTAC GTCAGTTTGA TTTTGCACAA TTAGACTCCC TTATGTCAGC AATGCGGAGT GGAAAAGCTT TGCAAGCTTT AGTCAAAGAT GGTCGCTCTT TGGCAAAATA CCCAGCAACT AGTCCATTAC TAGCTTTGCA GACAATTCTA GACAATATCC AAGAGCGTAA TCAGTTCCAA GGGCATCAAG GCTGGGTCAG GAGCGTCAGT TTTAGTCCTG ATGGTGAGTA TATCCTTACG GCTTCTGATG ACTGTACCGC CAGATTATGG AATCTCCAAG GCAAGCAATT AATTTCATTA CAAGGGCATG AAGATACAAT CTGGAGTGCC AATTTCAGCC CTGATGGCAA ATACATGGCG ACTGCTTCCT CTGACCGGAC AGCCAGGTTA TGGAACTTTA GGGGTCAACA ATTAGCTAAA ATTCAAGGGC ATCAGGGCTA TGTGCGGAGT GTGAGTTTCA GCTCTGATGG TAAGTACATC GCCACTAGTT CTGATGACCG CACAGCTAGG TTATGGAATT TTAGCGGTCA GCAGCTAGCG CAGTTTTCCG GACATCAAGG AACCGTCTGG TGTGTCAGTT TTAGCCCTGA TGGTAAACAC ATTGCCACAG CTGCTGATGA CCGAATAGTC CGGTTATGGA ACCTCAAGGG TAAATTGCTT GTCCGCTTCC CAGGACATCA AGATTGTGTT TGGGATGTAA GTTTTAGCCC CGATGGTCAG TATGTTGCTA CCGCCTCCTC TGACGGTACA GCCCGATTAT GGAACCTAGC CGGGGAACAG ATAAGCCGAT TTCGCGGCCA TCAAGATGTG GTTTGGAGTG TGCGTTTTAG CCCCAATGGT AAATATATCG CTACAGCTTC CTCTGACCGC ACCGCTAGGG TTTGGAATCT CAATGGTCAG CAACTAGAGC AATTCCCAGG ACATCAGGAC TACGTGCGGA GTGTGAGTTT TAGCCCTGAT GGTAAATATA TTGCAACTGC ATCTTCTGAC CGCACAGTCC GATTGTGGTA CCTAAACAAG CAGCAATTCC CCCCATTTAG AGGACATCAG AGTACAGTTA GGAGCATAGA TTTTAGCCCT GATGGGCAAC AGGTCGTTAC GGCTTCTGAT GACCGGACGG TACGTTTGTG GAGTATTCAA GGTGAGGAGC TTTTACAGTT CCTTGGACAT CGAGGAAAAG TTTGGAGTGT GAGTTTTAGC CCCGATGGTA AATACATTGC TACTACTTCC TCTGACCGGA CGGTGCGATT ATGGGATGTT ACAGGGCAAA TGCTTCAGCA ATTTCCAGGG CATCAAGGTA CAGTTTGGAG TGTGAATTTT AGCCCTGATG GCCAGCATAT CGCTACTGCT TCTTCTGACT TGACGGCTAG ATTATGGAGT CTTGATGGTC AGGAGTTGAT GCGATTTAAA GGGCATGATA AATGGGTGCG ATATGTGAGT TTTAGTTGTA ATGGAGAGCA TCTTGCCACT GCGGCTGATG ATTGTACAGC TAGATTGTGG AATCTCCAGG GACAACAGGT GGGGCAATTC TTGGGGCATC AAAGTACAGT TTGGAGTGTG AATTTTAGTC CTGACTGTCA ATATCTGGTG ACTGCTTCGG AAGACCATAC AGCCAAGTTG TGGACTCTGG ATGGGCAAAT ACTCACAGAA TTTAGAGGAC ATCAAGCCCC CCTGAAAAGT GCCGTTTTTA GTCATAATGG GCAGTATATC GCCACTAGTT CCGACGATCG CACCGTTCGG TTATGGAATC TTAACGGACA GCAAATAGCA CAATTTAAAG GACATAAAGG TGCAGTCAGA AGTATTAGTA TTAGTCCTGA TGATCAGTAT ATTGCCACAG CTTCTGATGA TCGCACCGTG AGATTATGGC CGATAGAAAA TTTAGACCAA CTACTCCGGC GTGGTTGCAA TTGGCTACAA GATTATCTAG AGAATAACAC TCATGTCACA GAGAGCGATC GCCGTCTGTG CGAGATATTA AAGTATTGA
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Protein sequence | MNNLPNSHNL TPENEQSLQT LVRAITFSQG EFSLILLRCN YAALRKRITQ QLHQISPIKI HEITLPETVK TLYTNINEQL GDEQPPALIV FGLESAKDID TVLTAANRVR EEFRKNFPFP ILIWVNDQVL QKFIRLATDL ENWATIIAFE SSTNELISFI QKKTDEVFIG DLIPNPQICW ELNRGIQDLQ NRGRELNQVI QANLEFVRGL HDYLYDNTDS ALAHYQDSLD FWQKNHNLKR QGILLFNIGL TYVRQAQKNQ IDNQDCYQKA RKYLQRCIAI LEKGHFDNLI AKYINTLGEV LRNLNAWPDL YNLAHKSLKL HKNYGQSLKI AQSYGFLAEV SLESFQWYEA KKLAQKALQR LKNISNQKVP ERSLYLFILA RSQKELNENT DAISNLLAAK NETCAYYNPR LYINILEMLS NVYFEQSQYL AAFQIKQEQL QIEQQYGFRA FVGASYLNPQ LQAINPAQLQ VYRKGTIAQE IVASGREKDV QRLRERISST EHKLTVIHGQ SGVGKSSILQ AGLIPALQEK PIAERDALPL LLRVYTDWVG TLGQNLAQAV EEVRGYKLSH DLNSALAIRE QLQKNSERHL LTVLIFDQFE EFFFVYTDKA SRKAFYEFLR FCLDIPFVKI VLSLREDYLH YLLELERLFN LGSINNNILD KNIRYYLGNF TPADAKAIIQ NLTEKTHFYL EPKLIDKLVE DLSCQFGEVR PIELQIVGAQ MQTEKINTLA KYCQFGTKEK LVERFLETVI RNCGSENEQM ARLVLYLLTD ENGTRPLKTR TDLASDLKPE VKTLDLILEI FVKSGLVLLL PEVPADRYQL VHDYLVPFIR QQQGNELLAE LEQEREQRKQ IEQELERVET ILTQVNAELE KQQIVLREVQ AGTTLEQEGV SALRQFDFAQ LDSLMSAMRS GKALQALVKD GRSLAKYPAT SPLLALQTIL DNIQERNQFQ GHQGWVRSVS FSPDGEYILT ASDDCTARLW NLQGKQLISL QGHEDTIWSA NFSPDGKYMA TASSDRTARL WNFRGQQLAK IQGHQGYVRS VSFSSDGKYI ATSSDDRTAR LWNFSGQQLA QFSGHQGTVW CVSFSPDGKH IATAADDRIV RLWNLKGKLL VRFPGHQDCV WDVSFSPDGQ YVATASSDGT ARLWNLAGEQ ISRFRGHQDV VWSVRFSPNG KYIATASSDR TARVWNLNGQ QLEQFPGHQD YVRSVSFSPD GKYIATASSD RTVRLWYLNK QQFPPFRGHQ STVRSIDFSP DGQQVVTASD DRTVRLWSIQ GEELLQFLGH RGKVWSVSFS PDGKYIATTS SDRTVRLWDV TGQMLQQFPG HQGTVWSVNF SPDGQHIATA SSDLTARLWS LDGQELMRFK GHDKWVRYVS FSCNGEHLAT AADDCTARLW NLQGQQVGQF LGHQSTVWSV NFSPDCQYLV TASEDHTAKL WTLDGQILTE FRGHQAPLKS AVFSHNGQYI ATSSDDRTVR LWNLNGQQIA QFKGHKGAVR SISISPDDQY IATASDDRTV RLWPIENLDQ LLRRGCNWLQ DYLENNTHVT ESDRRLCEIL KY
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