Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2100 |
Symbol | |
ID | 3680496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2593832 |
End bp | 2594977 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637717445 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_322617 |
Protein GI | 75908321 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00100338 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCCATTGA AATATGCTCT TGTTCATGAG TGGCTGACAC CAAAAGCCAC CGGCGGTTCA GAACTCGTTG TCAAAGAAAT TCTGCATCAT ATCGATGCCG ATTTATACGC TCTCATCGAC TTTGAGTCTA ACAATCCTGA AAGTTATTTG TACCAACGTC AGATTGGCAA GACCTTCCTC CAGCACTTTC CCTCGGCCCG TAATGGTATC CAAAAGTATC TACCATTTTT ACCCCTGGCA ATCGAACAAT TGGACTTGCG CCAGTATGAC GTAATCTTGT CCTCATCTCA TGCTGTTGCC AAAGGCGTAT TAACCACTGC TGACCAGTTA CATATTTGCT ATTGCCATAG TCCCATGCGC TACGCCTGGG ACTTAACCTT TGATTATTTG CGTTCCAGCC CAATGGGCAG TGGTGTTGCG GGATGGGTGA CTCGATACTT ATTACATCGT TTACGCCAAT GGGATGTGTT AAGCGCCAAT CGAGTAGATT ACTTCATTGC CAATTCCCAT TACACAGCTA GGCGTATATG GCGCTGCTAT CGGCGAGAAG CCAAAGTTAT TTATCCGCCG GTGAATGTCG CAGAATTTCC ATTTTTACCT CACAAAGAGG ATTTTTATCT CACAGTTTGC CGATTGGTGA GTTATAAACA GGTATCCCTA ATTGTGAAAG CGTTTAACCA ATTGCAACGG CCATTAGTCA TCATTGGTAC AGGTTCAGAA ATGAAACAGA TTCGCCAGCT AGCTAATTCT AATATCCAAA TATTAGGTTG GCAACCTGAT GATGTAGTCA AAAAGTATAT GGCCAAAGCC AAGGCTTTTG TCTATGCTGC CTGTGAAGAT TTTGGTATAG CTTTAGTAGA AGCACAAGCT TGTGGTACTC CGGTAATTGC CTATGGTATC GGAGGTGCCA CGGAAACAGT TAGGGATGTA CGATCTTATA AAGATACAGG AACAGGTATA TTTTTTAAAA TGCAAACTCA AGCAGCTTTG GTGGAGGCAG TAGAAAAATT TGAAATGTAT CAAGATGCTC TTGACCCTGA GTATATGCGA TCGCACGCTG CTGAGTTTTC CCCGCAAAAC TTTGCCAAGC GCTATCTAGA TTTTTTAGAC CAGTGCCATC AACAAAAGCC TAATTTAGCA GGTTAG
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Protein sequence | MPLKYALVHE WLTPKATGGS ELVVKEILHH IDADLYALID FESNNPESYL YQRQIGKTFL QHFPSARNGI QKYLPFLPLA IEQLDLRQYD VILSSSHAVA KGVLTTADQL HICYCHSPMR YAWDLTFDYL RSSPMGSGVA GWVTRYLLHR LRQWDVLSAN RVDYFIANSH YTARRIWRCY RREAKVIYPP VNVAEFPFLP HKEDFYLTVC RLVSYKQVSL IVKAFNQLQR PLVIIGTGSE MKQIRQLANS NIQILGWQPD DVVKKYMAKA KAFVYAACED FGIALVEAQA CGTPVIAYGI GGATETVRDV RSYKDTGTGI FFKMQTQAAL VEAVEKFEMY QDALDPEYMR SHAAEFSPQN FAKRYLDFLD QCHQQKPNLA G
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