Gene Ava_2097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2097 
Symbol 
ID3680493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2589792 
End bp2590826 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content43% 
IMG OID637717442 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_322614 
Protein GI75908318 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.822363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000115306 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTCAATAC TCTGTTACCT GAATCCTTAC GAACAAGGTT ATGAAGTTCA TGGTATTATT 
CGCCGGACTT CCACATTCAA TACAGACCGT ATCGATCACA TTTATGAAGA TCCCCATCAA
GAAGGAGCCA AGTTATTTCT TCACTACGGT GATTTAACCG ATGGTACAAC GCTACGCCGA
ATTCTTGAAG AAGTTCAACC AACAGAAATT TACAACTTAG GCGCTCAATC TCACGTACGA
GTAAGCTTTG ATTCGCCAGA GTATACAGTA GATGCCGTAG GTATGGGAAC ACTACGGTTA
CTAGAAGCAA TCCGTGACTA CCAACGACGC ACAGGCATTC AAGTACGTTT TTACCAAGCT
GGTTCTTCAG AAATGTATGG CTTAGTGCAA GCCGTACCCC AAAGCGAAAC TACACCATTT
TATCCCCGTA GTCCCTACGC TTGTGCCAAA GTTTATGCCC ACTGGCAAAC AGTCAATTAC
CGGGAATCTT ACGGTTTATT TGCTTGTAAT GGCATACTTT TTAACCATGA ATCACCTCGT
CGCGGTGAAA CTTTTGTTAC CCGCAAAATT ACTAGAGCTG TTGCCCAGAT TGTTGCCGGC
AATCAGAAAA ACATCTATAT GGGTAACCTT GATGCCAAGA GAGATTGGGG TTATGCCAAA
GATTATGTCC GTGCCATGTG GTTGATGTTA CAGCAAGAAC AACCAGATGA TTATGTAATT
GCTACAGGAG AAACCCACTC AGTACGTGAA TTTTTAGAGT TGGCGTTTGG CTATGTAAAT
CTTAACTGGC AAGATTATGT AGAGTTTGAT GAGCGTTATC TGCGTCCGGC GGAAGTAGAT
TTATTAATTG GTGACCCCAC GAAAGCACAA CAAAAATTGG GATGGAAGCC TTCTGTCACC
TTTAAAGAAT TGGTGGCATT AATGGTAGAA GCCGATTTGC AAGCTTTAGG TCAGACTTCA
CCTAATGGCA ATACTTCAAT CCTACCGCAG GATATTGCTA CTATTCGTCA ACAACTGGGT
GTACTCCACT TCTGA
 
Protein sequence
MSILCYLNPY EQGYEVHGII RRTSTFNTDR IDHIYEDPHQ EGAKLFLHYG DLTDGTTLRR 
ILEEVQPTEI YNLGAQSHVR VSFDSPEYTV DAVGMGTLRL LEAIRDYQRR TGIQVRFYQA
GSSEMYGLVQ AVPQSETTPF YPRSPYACAK VYAHWQTVNY RESYGLFACN GILFNHESPR
RGETFVTRKI TRAVAQIVAG NQKNIYMGNL DAKRDWGYAK DYVRAMWLML QQEQPDDYVI
ATGETHSVRE FLELAFGYVN LNWQDYVEFD ERYLRPAEVD LLIGDPTKAQ QKLGWKPSVT
FKELVALMVE ADLQALGQTS PNGNTSILPQ DIATIRQQLG VLHF