Gene Ava_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2079 
Symbol 
ID3680552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2570660 
End bp2571316 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content45% 
IMG OID637717424 
Producthypothetical protein 
Protein accessionYP_322596 
Protein GI75908300 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.204058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000474177 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGAGTAT ATCACCGAAT CCGGGTATCT CGTCAGACAA CAACTTTACC TAACATAATT 
CTCACCAAAA AAATGATCGC AGCCAAAGAC AAAGCCCCCC AGCTAACCCC ACAAGAATAC
TTTATTTGGG AAGAACAGCA GCTAGAAAAA CACGAGTATA TCAACGGCGA AGTTTACGCC
ATGACTGGCG GTAGCGTCAA TCACGGGCGT ATCGCCATCC GCTTCACCGC CATGTTCGAC
AGCCACTTAC AAAATACAGG TTGCATCACT GGAAATTCTG ATATCAAAGT CAATATCTTT
GGCAGTAATA ACTATACCTA CCCAGATGCC AGCGTTACCT GCGACGTTCG CGATCAAACC
ACAACTCAAT ATATTACCTA CCCTTGCTTA ATCGTCGAAG TCCTCTCAAA AACTACCGAA
GCCTACGACA GAGGCGGCAA ATTCCGAATG TACCGCCAAA ACCCAGCTTT GATCGATTAC
CTACTAGTCA GTTCTACTAG CGTCGAAATC GACCTGTATC ACAAAAACGA TGCAGGCGAT
TGGTTGATTA TCAACTACAA ACCAGGCGAC ACTATCGAAC TCAAAAGCAT TAACCTCAAT
TTCCCCATTG AAAAAGTCTA TCGCGGTTTA ACCCTCGAAC CAGAAAATGG GGGATAG
 
Protein sequence
MGVYHRIRVS RQTTTLPNII LTKKMIAAKD KAPQLTPQEY FIWEEQQLEK HEYINGEVYA 
MTGGSVNHGR IAIRFTAMFD SHLQNTGCIT GNSDIKVNIF GSNNYTYPDA SVTCDVRDQT
TTQYITYPCL IVEVLSKTTE AYDRGGKFRM YRQNPALIDY LLVSSTSVEI DLYHKNDAGD
WLIINYKPGD TIELKSINLN FPIEKVYRGL TLEPENGG