Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2079 |
Symbol | |
ID | 3680552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2570660 |
End bp | 2571316 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637717424 |
Product | hypothetical protein |
Protein accession | YP_322596 |
Protein GI | 75908300 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.204058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000474177 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGGAGTAT ATCACCGAAT CCGGGTATCT CGTCAGACAA CAACTTTACC TAACATAATT CTCACCAAAA AAATGATCGC AGCCAAAGAC AAAGCCCCCC AGCTAACCCC ACAAGAATAC TTTATTTGGG AAGAACAGCA GCTAGAAAAA CACGAGTATA TCAACGGCGA AGTTTACGCC ATGACTGGCG GTAGCGTCAA TCACGGGCGT ATCGCCATCC GCTTCACCGC CATGTTCGAC AGCCACTTAC AAAATACAGG TTGCATCACT GGAAATTCTG ATATCAAAGT CAATATCTTT GGCAGTAATA ACTATACCTA CCCAGATGCC AGCGTTACCT GCGACGTTCG CGATCAAACC ACAACTCAAT ATATTACCTA CCCTTGCTTA ATCGTCGAAG TCCTCTCAAA AACTACCGAA GCCTACGACA GAGGCGGCAA ATTCCGAATG TACCGCCAAA ACCCAGCTTT GATCGATTAC CTACTAGTCA GTTCTACTAG CGTCGAAATC GACCTGTATC ACAAAAACGA TGCAGGCGAT TGGTTGATTA TCAACTACAA ACCAGGCGAC ACTATCGAAC TCAAAAGCAT TAACCTCAAT TTCCCCATTG AAAAAGTCTA TCGCGGTTTA ACCCTCGAAC CAGAAAATGG GGGATAG
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Protein sequence | MGVYHRIRVS RQTTTLPNII LTKKMIAAKD KAPQLTPQEY FIWEEQQLEK HEYINGEVYA MTGGSVNHGR IAIRFTAMFD SHLQNTGCIT GNSDIKVNIF GSNNYTYPDA SVTCDVRDQT TTQYITYPCL IVEVLSKTTE AYDRGGKFRM YRQNPALIDY LLVSSTSVEI DLYHKNDAGD WLIINYKPGD TIELKSINLN FPIEKVYRGL TLEPENGG
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