Gene Ava_2073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2073 
Symbol 
ID3680546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2564633 
End bp2565406 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content46% 
IMG OID637717418 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_322590 
Protein GI75908294 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.534313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00421033 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCAGC GCTACGTGCG AGTTCAAAAT CGGGAAGGTA AGATTTACTA TGGGTTGCTA 
CAACTGTCTT TCAATGTGCA GGTTCTAGAT GCTCCACCGT GGCTGCATGG ACAACCCACA
GACCTAATTT TAGAACCAGA TCATTATCAA ATTTTGGCTC CCTGCGCTCC TTCTAAAATT
GTCGCAGTGG GCAAAAATTA TGCAGATCAT GCAGCCGAAA TGGGAACGTC AGTTCCAAGT
GAACCACTAA TTTTCCTGAA GCCACCAACA ACGATTATTG CCTCGGAGAC AGAGATTAAA
TATCCTCTCC AGTCGCAACG AGTGGATTAT GAAGGAGAAT TAGCCTTGAT CATTGGCGAT
CGCACTTGTA ACTGTACACC AGAGGAAGCC CAAACTAAAA TTTGGGGTTA TACCATTGCC
AATGATGTGA CAGCGCGGGA TTTACAGCGA AAAGATGGGC AATGGACAAG AGCTAAAGGT
TTTGATACTT TCTGCCCATT GGGACCTTGG ATTGTCCGCG AATTGAGTCC AGGGGCAAGA
TTACAGACCT TTCTCAATGA TGATGCTAAT CCCGTACAAT CGGCGGGAAT TGATCAAATG
GTATTTGCCC CTGATTTTTT GGTGTCATAT ATCAGTCAGG TGATGACATT GCTTCCCGGA
GATGTGATTT TAACGGGTAC GCCAGAGGGT GTAGGAGCTT TGCAACAAGG CGATCGCATC
CGTGTAGAAA TTGAAGGTAT CGGTCGCCTA GAAAACACCG TAGCAGCCCA TTAA
 
Protein sequence
MAQRYVRVQN REGKIYYGLL QLSFNVQVLD APPWLHGQPT DLILEPDHYQ ILAPCAPSKI 
VAVGKNYADH AAEMGTSVPS EPLIFLKPPT TIIASETEIK YPLQSQRVDY EGELALIIGD
RTCNCTPEEA QTKIWGYTIA NDVTARDLQR KDGQWTRAKG FDTFCPLGPW IVRELSPGAR
LQTFLNDDAN PVQSAGIDQM VFAPDFLVSY ISQVMTLLPG DVILTGTPEG VGALQQGDRI
RVEIEGIGRL ENTVAAH