| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2066 |
|---|
| Symbol | |
|---|
| ID | 3680539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 2558281 |
|---|
| End bp | 2558820 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637717411 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_322583 |
|---|
| Protein GI | 75908287 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.253974 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.186076 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAG CTAAAGGTTT AGGTATTGCA ACTATTGCGG CAATTTCTGT TGCTGCTGTT
GGTGTTCAAC CAACACAAGC GGCAATAGTT AATTACAATT TCATCGTTGA TGCTACATCT
GGCAGCAATC CAGGTCAGTA TTTCGGTTCA CTTAAATACG ATGACTCGTT CTTAACTGGT
TTAGGGCTGG AGACATTGGG AGTTGAGAAT GGGTTAGAAG TTAAATTCAA CTACTTAGGT
AATACCTATA CAGAAGAAGA TGATGAATTC TATGATTTAT ACCCGATAGT TAGCTTTAAC
GACGGTAAAC TTTTGGGACT CAGTTATTTT GTTGCAGACA AGTTTTTCAT CGGCAATGAA
AATAATCTCG ATGTAGGCGG AAATATATTT TATGAAATTG ACGGATCAGT ATTTGCCACA
GAAGCGGGTA CTGTCAGCTA CAGTCAAGTA CCAGAACCCT TTGCAGTTAG TGGTATAGCG
ATCGCTGGTA CAGTGGGATT ATTTATGAAG CGTAAGAAAA AAGCCACAGT AGCAAGCTAG
|
|---|
| Protein sequence | MKLAKGLGIA TIAAISVAAV GVQPTQAAIV NYNFIVDATS GSNPGQYFGS LKYDDSFLTG
LGLETLGVEN GLEVKFNYLG NTYTEEDDEF YDLYPIVSFN DGKLLGLSYF VADKFFIGNE
NNLDVGGNIF YEIDGSVFAT EAGTVSYSQV PEPFAVSGIA IAGTVGLFMK RKKKATVAS
|
|---|
| |