Gene Ava_2053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2053 
Symbol 
ID3680702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2541482 
End bp2542825 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content48% 
IMG OID637717398 
Productadenylosuccinate synthetase 
Protein accessionYP_322570 
Protein GI75908274 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTAACG TCATTGTAAT AGGCGCTCAA TGGGGCGATG AAGGAAAAGG TAAAATAACT 
GACTTACTCA GCCGCTCCGC AGATGTGGTA GTACGCTATC AAGGGGGTGT CAATGCTGGA
CACACAATTG TAGTCAAAGG TCAGACCTTT AAACTGCATT TGATTCCCTC TGGTATTTTG
TACCCCGATA CGGAATGTAT GATCGGCTGT GGGACGGTCA TCGATCCACA AGTTTTGATA
AAAGAACTCG ACCAATTAGA AAGTTTAAAT ATTTCTACTA AAAATCTGCT CATCTCTGAA
ACAGCCCATG TCACCATGCC CTATCATCGG CTAATTGACA AGGCATCAGA AGAGCGACGC
GGAAGCCATA AAATTGGAAC CACTGGTCGA GGGATTGGCC CTACCTACGC TGATAAATCC
GAGCGCACAG GTATCAGGGT ATTAGACTTG ATGGACCCGG CGGCCCTCCG CGACCAGTTG
GCATGGACAA TAAATAATAA GAACCTCATT TTAGAAAAGC TGTATAACCT GCCACCTCTA
GATACTGAAG AGGTCGTCAA AGAATATTTA GGGTATGCAG AACGTTTGAG ACCTCACGTT
GTTGATACAT CTTTAAAGAT ATATGATGCC ATTCAACGGC GGCGTAACAT ATTGTTTGAA
GGCGCACAAG GTACGCTCTT AGACTTGGAT CATGGGACTT ATCCCTATGT CACTTCTTCC
AACCCCGTAG CTGGGGGGGC TTGCGTAGGT ACAGGTCTAG GCCCGACAAT GATAGATCGG
GTAATTGGGG TTTCCAAAGC CTACACAACA CGAGTCGGAG AAGGCCCATT CCCTACCGAA
CTGGATGGGG AGTTAGGGGA ATTATTGTGC GATCGCGGGG CAGAATTTGG CACCACTACC
GGACGTAAGC GTCGCTGTGG TTGGTTTGAT GCGGTTATCG GTCGCTACGC TGTGCGAATT
AACGGCATGG ATTGTATGGC TATCACCAAA CTGGATGTCC TTGACGAGTT AGAGGAAATT
CAAGTTTGTA TAGCCTATGA AATAGACGGC GATCGCTGCG ACCATTTCCC AACTAGCGCT
CGTCAGTTTG CCCGGTGTCG TCCTATTTAC AAAACCCTCC CAGGCTGGCA AGTGCCAACA
AGCGAATGTC GCACCCTGGA AGACTTACCC CAACAAGCAC TGGACTATCT AAAATTCCTC
GCAGAATTGA TGGAAGTCCC AATTGCGATC GTTTCTTTAG GCGCAAGCCG CGATCAAACT
ATCATCGTTG AAGACCCTAT CCACGGGCCA AAACGTGCCT TGCTGCACCC CGATGGTACT
CCCGCCTCTT TGTTGAGTGC ATAA
 
Protein sequence
MANVIVIGAQ WGDEGKGKIT DLLSRSADVV VRYQGGVNAG HTIVVKGQTF KLHLIPSGIL 
YPDTECMIGC GTVIDPQVLI KELDQLESLN ISTKNLLISE TAHVTMPYHR LIDKASEERR
GSHKIGTTGR GIGPTYADKS ERTGIRVLDL MDPAALRDQL AWTINNKNLI LEKLYNLPPL
DTEEVVKEYL GYAERLRPHV VDTSLKIYDA IQRRRNILFE GAQGTLLDLD HGTYPYVTSS
NPVAGGACVG TGLGPTMIDR VIGVSKAYTT RVGEGPFPTE LDGELGELLC DRGAEFGTTT
GRKRRCGWFD AVIGRYAVRI NGMDCMAITK LDVLDELEEI QVCIAYEIDG DRCDHFPTSA
RQFARCRPIY KTLPGWQVPT SECRTLEDLP QQALDYLKFL AELMEVPIAI VSLGASRDQT
IIVEDPIHGP KRALLHPDGT PASLLSA