Gene Ava_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2048 
Symbol 
ID3680697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2535646 
End bp2536410 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content33% 
IMG OID637717393 
ProductFatty acid desaturase 
Protein accessionYP_322565 
Protein GI75908269 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAT GTAATTCCAT ATCTTTGCAA TTAACAAAGG TAATTGCTGA TGTGAAAACT 
GAAAATATGA CTAATAAAGG AATTCTTATC GCTTTTTTTA TTATAACTTT GTGGGGCAGC
AATTTAACAC TATTACTGTC ATTGGATACC GCTAAAATCC AGCTTCCATT GATAGTATTA
GCTATAATTT GGCAAACATT CTTATATACA GGATTATTTA TTACTGCTCA TGATGCCATG
CACTGTCTTG TTGTTGCCAA AAATCCTCAA GTCAATGATT GGATAGGCAA GATATCTGTA
ATACTTTATG CGCTATTTTC CTATAAGAAC TTAGTAGAAA AACATAGTTT GCATCACCAA
TATCCTGGAA CTGAAACTGA TCCAGATTTC GACCATAATC AAAACCAAAA TGTCTTTATT
TGGTATTTTA AATTTATGAT GTCGTACTGG GATTGGCGAC AAATTGTCGG CTTAACATTA
ACTTTTCATC TTTCACATCA TGTCTTGCAT ATATCCTACA TGAATCTTAT TTTGTTTTGG
GTTACACCCT CTATTTTAAG TTCCATACAA TTATTTTATT TTGGGACATT TCTACCACAT
AAAAGGCGGG AAGGCGGATA TACAAATCTG CATTGCACAC AAAGTACTCC ATTGCCTGTT
TTTTGGTCAT TTATCACTTG TTATCACTTT GGTTATCACA AAGAACATCA TGAATATCCT
CAGATCCCTT GGTGGAGATT ACCAGATGTT TATAATAATA ATTAA
 
Protein sequence
MTECNSISLQ LTKVIADVKT ENMTNKGILI AFFIITLWGS NLTLLLSLDT AKIQLPLIVL 
AIIWQTFLYT GLFITAHDAM HCLVVAKNPQ VNDWIGKISV ILYALFSYKN LVEKHSLHHQ
YPGTETDPDF DHNQNQNVFI WYFKFMMSYW DWRQIVGLTL TFHLSHHVLH ISYMNLILFW
VTPSILSSIQ LFYFGTFLPH KRREGGYTNL HCTQSTPLPV FWSFITCYHF GYHKEHHEYP
QIPWWRLPDV YNNN