| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2047 |
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| Symbol | |
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| ID | 3680696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2533158 |
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| End bp | 2535455 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637717392 |
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| Product | retinal pigment epithelial membrane protein |
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| Protein accession | YP_322564 |
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| Protein GI | 75908268 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.211058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTTA AAGTAAATGG ACGAATTTAC GAAGAAGAAA GCGGAGTAGG TATTGCTAAT
TTAGTTGTCG AAGCCTTTGA TAAAGATATC CTCAAAAATG ATAAACTTGG TCAAACAAAA
ACTGATCAAG ATGGCAAGTT TGCGATTAAT TATTCAGAAG CAAATTTCAA AAGCGCATTA
GAAAAGTTTG AAGGTAATCC CGATTTATAT ATCGTTGTTA AAACTCCAGA CCTTGCCAAT
ATTTTGTATA GTAGTGAGAA GAATATCCGC CCTGATGCTA GTACAAACGA GCATTTCGAC
GTACCTATTC CGAAAACAAC TTTAATAGCT TATCAAGAAC GATCAACTCA AGAAAATAAA
CAACTATTAA AAATTCTGCT GGGGATGGCT TGGCTAGATG GGGAACTCGA ACCTGGAGAA
AAAGAATATT TATCCAAAGT CGCAGCCCAA AAAAGATTAA CTGAAGATGC AGAGATTAAA
AGTTTATTAT CTGATAGTAA GCCAATACAG CCCCAGCAGT GTTTTGATTG GTTACAAGCT
TATTTAGGCA AAAATCCTAG CCCTTACAAA TTTGAGGCTT TAGATGAAGT TTTAGAAAGC
TTATTCACCA GTGGCGCAGA AATAGACGAA CGAGAAAAAG AAATGTTAGC GGCTTTTGCT
GACAAAAATA CTCGTCAAAC GGTTCTCCAG GAAAGACTAG GCAGCATTTT CCTCGATCCA
GATTTCTTAG CTAAAGTCAC TCCTGACACC CCAGATTCCC CTCAAACTGC CCGTAAAAAC
CTCAAAAAAG GCTTTGCTTA TGCTCGTGTT CCCCAAGCAG TTTTAAGTAA ACTCACATCT
GCACAGTCTG ATCCGCAAGT CAAGGAAGAA TTAGCCCATC GCTTTTTAAC TCTCAACTAT
GCTCCAGTCC GCAAAGAAAT TACGGCTGAT AACCTAGAAG TGATCGGCAA ACTACCACAA
GAGTTGTCAG GGACGTTTCT CCGGATTGGG CCGAACCCCC GCTTCGCTCC TTTGGGTCTT
TATCATTGGT TTGATGGAGA CGGTATGATT CACGGGGTAC AAATTAAAAA TGGTAAGGCC
AGCTATCGTA ATCGTTACGT TCGTACTGAA GGATGGAAGA TTGAAGAAAA AGAAGGTCAA
GCTATCTGGC CAGGATTGCT GAATCTACCC CGCTTCGATG AACCCCACGG CATTATGATG
AAAAATGTAG CCAATACCGC TTTAGTTTGG CATCACGGAC GGTTACTCGC TCTTTGGGAA
GGAGGCGAAC CTTATGAAAT TAGCCTTCCC AATTTAGACA CTGTCGGTTC TTATACCTTT
AATGAGCAGT TAACCTTCCC CTTTTGCGCC CACCCCAAAG TCGATGCTAG AACCGGGGAA
ATGATGTTCT TTGGTTATCA ACCCCTAACC AAGCCCTACG TTCAATATGG TATCGTCTCA
CCAGAAGGAA AAATTGTCAA AACCATACCA ATTGACATTC CTTCTCCAAT TAGTATGCAC
GACTTTGCTA TTACGGAAAA ATATACTATT TTCCTCGATA TGCCTCTAGC CCTCAAACCG
ATGCGAGTTA TGCAGGGCAA AGTTCCCCTC GTGTTTGAAC GTAATAAACC GAGTCGTTTT
GGTATTATTC CTCGGCATGG GGGAGAAATA CGCTGGTTTA CCGTGCCGAG CTGTATGGTC
TACCATGTAG TCAACGCCTA TGAAGAAGGT AACGAGGTAA TTTTAGTTGC CTATCGCATG
GATTGGACAC AACTATTTAT CCCTGACAGA GAAAACGCCC TCGATTTTGT CAACACCGAC
ACCTCGTCAG AAAAACTTGC CCCAGAAATG ACGAAATTGT ATCGTTGGCG GTTTAATCTT
TCTACTGGTC AAGTCAAGGA GGAAATACTT GACAAAGACG AAATTTGTGA GTTCCCCCGC
ATCAACGATC GCTTAATTGG ATGCAAGATG CGTTATGTGT ACTCCGGAAT CGGGGCTATG
TATATGGAAC GCCCGCTATT TGATGGAGTC AAGAAGTATG ACTTAGAATC CGGAACAGCG
CAATCTGTTT ATTTTGGTCG TGGACGCTTT GGTGGTGAAT GTGTCTTTGC ACCTCGTCCT
GGTGGCAAAA CTGAAGATGA TGGATGGGTA TTGACTTATA TTTATGATGC CGTTAACAAG
CGATCGGAAT TTATTGTGTT AGATGCCCAG AATATCACTG CTGAACCTGT CGCCCGTGTT
ATTCTTCCTC AAAGAGTTCC CTTTGGCTTC CATTGTGAGT GGGTTTCTAG CGAGAAAATG
GCAACCGCGA ACAGATAG
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| Protein sequence | MLFKVNGRIY EEESGVGIAN LVVEAFDKDI LKNDKLGQTK TDQDGKFAIN YSEANFKSAL
EKFEGNPDLY IVVKTPDLAN ILYSSEKNIR PDASTNEHFD VPIPKTTLIA YQERSTQENK
QLLKILLGMA WLDGELEPGE KEYLSKVAAQ KRLTEDAEIK SLLSDSKPIQ PQQCFDWLQA
YLGKNPSPYK FEALDEVLES LFTSGAEIDE REKEMLAAFA DKNTRQTVLQ ERLGSIFLDP
DFLAKVTPDT PDSPQTARKN LKKGFAYARV PQAVLSKLTS AQSDPQVKEE LAHRFLTLNY
APVRKEITAD NLEVIGKLPQ ELSGTFLRIG PNPRFAPLGL YHWFDGDGMI HGVQIKNGKA
SYRNRYVRTE GWKIEEKEGQ AIWPGLLNLP RFDEPHGIMM KNVANTALVW HHGRLLALWE
GGEPYEISLP NLDTVGSYTF NEQLTFPFCA HPKVDARTGE MMFFGYQPLT KPYVQYGIVS
PEGKIVKTIP IDIPSPISMH DFAITEKYTI FLDMPLALKP MRVMQGKVPL VFERNKPSRF
GIIPRHGGEI RWFTVPSCMV YHVVNAYEEG NEVILVAYRM DWTQLFIPDR ENALDFVNTD
TSSEKLAPEM TKLYRWRFNL STGQVKEEIL DKDEICEFPR INDRLIGCKM RYVYSGIGAM
YMERPLFDGV KKYDLESGTA QSVYFGRGRF GGECVFAPRP GGKTEDDGWV LTYIYDAVNK
RSEFIVLDAQ NITAEPVARV ILPQRVPFGF HCEWVSSEKM ATANR
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