Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2027 |
Symbol | |
ID | 3680968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2509590 |
End bp | 2510795 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637717372 |
Product | periplasmic sensor Signal transduction histidine kinase |
Protein accession | YP_322544 |
Protein GI | 75908248 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.109719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.72788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAAT ATATTAAAGT TCATAACCAC CCTTTCCGCT TTTTACTATA TCTAGAATGG ATATTGTTGG CAATATCTAT TATCACATCG ATATTGCCCT ATCCCTCACC TAGATTTTCC AGTAGGTTTC CAGAAATTAC GATTATTAGT CTCACAATTT TTGGATTAAT GGGACTAAGA TTACCTACTA GTAATAACCT AAATAAAATA GTTTATACTG CCTGTGAAAT AATTTTAATT TTCATTACTG GACTATTTGA AGGGAGAGCA GCTCGAATGT TTCCCTTTCT CTACATCATT TTAGTGACTC GTAGTTGTTT AATCTTTAAG TTACCTGGAC GGTTATCTGT CACTTTGATT TCGTTTAGTT TGTTTTTATT CACCTTAATA AATCGATTAC CTCGTCCTCC ACTTCCACTA CAAGCTCAAG AGCGTTTTCG CTTTTTCACG CTGAGTTTGA CACTTGTATT TGGCTTAAGC TTAATTTTCG TCTTGCTGTT AATGAATAGC TTATTATCAG AACGTCAGAG TCGAGAAGAA CTAGCCGTTG CGAATGAAAA ACTACGTCAA TATGCTCTAC GTATTGAAAA CCAAGCAACT CTAGAAGAAC GCAATCGCAT TGCGCGGGAA ATTCACGACT CTTTAGGTCA TTCGCTCACA GCATTGAATT TACAATTAGA AACTGCGCTA AAACTTGCAC AGTCTAATCC CAATAAAGCA CAAACTTTTT TAGTTAGGGC AAAAGAGCTT GGTTCTAAAG CTTTACAAGA TGTGAGAAAT TCTGTTTCTA CTATGCGATC TCATCCATTG CAGGACAAAA CTTTAGAGCA AGCAATAGAT ATCATAGCAG AAGACTTTCA ACAGAATACC GGGATTATAT TAACTAGTAG TTTTAATCTT GATTATAAAT TATCAACAGA AGTTAGTACA GCCATATATA GGATCATTCA AGAATCTTTA ACTAATATTT CTAAGCACGC CAGAGCCACA GAAGTTATTT TAGAAATTTC TCTCAATCGA GGTAGCTTAT CTTTGATAAT TCGGGATAAT GGTAGAGGGT TTGATATACA ACAAAATACT ACAGGTTTTG GATTACAAAG TATGCGCGAT CGCACTTTGG CTTTAGGAGG AAAATTTGCC ATCAATAGCG ATGTTGGTTA TGGTTGTCAA ATTACAGTTG ATATTCCTGC AAGCAGATTA ATATGA
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Protein sequence | MGQYIKVHNH PFRFLLYLEW ILLAISIITS ILPYPSPRFS SRFPEITIIS LTIFGLMGLR LPTSNNLNKI VYTACEIILI FITGLFEGRA ARMFPFLYII LVTRSCLIFK LPGRLSVTLI SFSLFLFTLI NRLPRPPLPL QAQERFRFFT LSLTLVFGLS LIFVLLLMNS LLSERQSREE LAVANEKLRQ YALRIENQAT LEERNRIARE IHDSLGHSLT ALNLQLETAL KLAQSNPNKA QTFLVRAKEL GSKALQDVRN SVSTMRSHPL QDKTLEQAID IIAEDFQQNT GIILTSSFNL DYKLSTEVST AIYRIIQESL TNISKHARAT EVILEISLNR GSLSLIIRDN GRGFDIQQNT TGFGLQSMRD RTLALGGKFA INSDVGYGCQ ITVDIPASRL I
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