| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2025 |
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| Symbol | |
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| ID | 3681297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2506172 |
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| End bp | 2508232 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637717369 |
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| Product | glycogen debranching protein |
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| Protein accession | YP_322542 |
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| Protein GI | 75908246 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.242432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.373695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGATT TAGATACAAG AGAATGGTTG CTGACTAATG GCTTAGGAAG TTTTGCCAGT
GGTACTGTTT CGGATATCCG TACACGAACC TACCACGGTT GGCTATTTGC ATCGACAAAT
CCGCCTTCTG GACGCACCTT ACTGCTGTCG CACCTAGAAG CTAGTTTAGA AGTCTCAGGA
AAAGTCGTAG CATTGGGGAC GAATATTTGG GGTACAGGTG AGATTGCACC CACTGGTTAC
AAGCTACTAC GTTCTTTTGA TGTTAACCCA GTACCTAAGT GGATTTGGGG TGAAGGAGAC
TGGCAATTAA GTAGGCAACT TGTGATGCCT TACGGTGTAG TGGAAAGTGG AGAAGAATGT
GAACTCAAGG CTCAAGAATC TCAATTTCGC CATCGGTTAT TAATTCACTA TCGTTACGAA
GGTAGAGAAA CTGCCGTATT GAGACTGCGA TTGCTAATTG CCGATCGCGA CTTTCACCAT
CAACAAACCA ATAGCCTAGA TTTACAATTT TCCCAAGTCC TGGGTAACAA GCAAATCTAC
TTGCAAGCCA TGAATTCTGG TAGTTTCGGC ACACCTTGGC AGTTGCGGTG GTCGCAAGGA
GAATATCAAG CCAATGCAGT TTGGTATTGG CGTTATGGCT TACCAGAAGA AACACAACGG
GGATTAGGCG ATCGCGAAGA CCTCCACAGC CCTGGTTATT TGACAGTGAC TCTCCAACCA
GGAGACACAG TCACTCTAGA AGCACGGATG GGTTTTCCGG CTGAACTCAC AGATTCCTTA
ACCAGCGACA CCTTTGCCGA AGCCGTGGAA GCAGAGCAAG AAAGACTGTC TCAGGTTTTT
GGTTGGGAAT GGGGGGAAGA TAGGAGCGAT GGGGAAGAAT CTTTCCATAT TTCCTCCTCA
TCCCCACTTT GGCAGCAACT ACTCAAAGCC GGGGATCAAT TTATTGTCTA TCGAGATTCC
ATTGCAGGCC CTACGGTAAT TGCTGGTTAT CACTGGTTTA ATGATTGGGG ACGTGATACG
TTAATTGCCT TACCTGGTTT AGCTTTAGTA CCCAAGCGTT TTGAATTAGC AAAAGGTCTG
TTGCAAACCT TTGGGCGTTA TTGCCGCCAC GGTTTGATAC CTAACGCTTT TCCTGATATT
GACAGCGAAC CATATTACAA CAGTATTGAT GCAGCCCTAT GGTGGATTGA AACTTTAGGA
CTGTACCTGG AAGCTACCCA AGATTGGCAA TTTTTGGCGG AACAGTTCCC CACTGTCCAG
CAAATTTACA AAGCATATTT TGGTGGTACT CGCTACAATA TCCAACTCGA TGCGACTGAT
GGTCTGATTG GCTGGGATGC TCCAAATGTT GCCCTTACCT GGATGGATGC GGTAGTTGGG
GGAGAGCCGA TGACTCCTCG TCCAGGTAAA GCAGTGGAAA TTAACGCTCT GTGGTATTCT
GCTTTATGTT GGCTGAGTCA ATGGGCTGAA CGATTGAGTC AGATGGATTT GGGTGATTCT
GTTCGTCTGG AAAAACAGGG GCGGCGTTAT GCTCAACAAG CCCAACAGGT GAAAGCTTCT
TTGCAAAAAT TTTGGAATCC ACAGCTTGGT TATTTGTACG ACACCATCGA TTTAGACGAT
CGCCGGAACG CACAAATTCG TCCCAACGCG ATTTTAGCTT TGTCTTTACA CCACTGCGGA
TTTTCCCAAA AACAGGGACA ACAAATATTA GATTTGGCAA CTTATCGCCT GTTAACCCCC
TATGGTCTTC GTAGCCTCGA TCCGGCAGAT CCAGAATATA TTGGCAGATA TGAAGGCAAT
CCCGAAAAAC GCGATCGCGC TTACCATCAA GGTACCGTTT GGACTTGGCT AATTGGGCCT
TTTATCCGCG CTTGGCAGCG TTTTTACCCA GAACAACCAT TGCCTTTTGA TTGGCAACCT
CTATTAGATC ACTTTTTAAG TGATGCTTGT CTGGGTTCTA TTTCCGAAAT TTTTGATGGT
GACCCTCCTC ATAGAGCAAG AGGAGCCGTA GCACAGGCTT GGTCAGTCGC AGAAGTGATT
CGCCATTTGC GGACGACATG A
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| Protein sequence | MDDLDTREWL LTNGLGSFAS GTVSDIRTRT YHGWLFASTN PPSGRTLLLS HLEASLEVSG
KVVALGTNIW GTGEIAPTGY KLLRSFDVNP VPKWIWGEGD WQLSRQLVMP YGVVESGEEC
ELKAQESQFR HRLLIHYRYE GRETAVLRLR LLIADRDFHH QQTNSLDLQF SQVLGNKQIY
LQAMNSGSFG TPWQLRWSQG EYQANAVWYW RYGLPEETQR GLGDREDLHS PGYLTVTLQP
GDTVTLEARM GFPAELTDSL TSDTFAEAVE AEQERLSQVF GWEWGEDRSD GEESFHISSS
SPLWQQLLKA GDQFIVYRDS IAGPTVIAGY HWFNDWGRDT LIALPGLALV PKRFELAKGL
LQTFGRYCRH GLIPNAFPDI DSEPYYNSID AALWWIETLG LYLEATQDWQ FLAEQFPTVQ
QIYKAYFGGT RYNIQLDATD GLIGWDAPNV ALTWMDAVVG GEPMTPRPGK AVEINALWYS
ALCWLSQWAE RLSQMDLGDS VRLEKQGRRY AQQAQQVKAS LQKFWNPQLG YLYDTIDLDD
RRNAQIRPNA ILALSLHHCG FSQKQGQQIL DLATYRLLTP YGLRSLDPAD PEYIGRYEGN
PEKRDRAYHQ GTVWTWLIGP FIRAWQRFYP EQPLPFDWQP LLDHFLSDAC LGSISEIFDG
DPPHRARGAV AQAWSVAEVI RHLRTT
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