| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2023 |
|---|
| Symbol | |
|---|
| ID | 3681295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 2504524 |
|---|
| End bp | 2505060 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637717367 |
|---|
| Product | putative thiol-specific antioxidant protein |
|---|
| Protein accession | YP_322540 |
|---|
| Protein GI | 75908244 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.384387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.424678 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACTT CAACAGATTT TAGTGGCTTA TTGAATGAAC GGTTCTTTCG TAATTTCTTG
CCTATTCCCG CTAGCAACGA ATTAAGGCTA GATGTAGGAA CACCAGACTT TCAATTACCA
GATATTACCA ATGGAACATT AGTTAAACTA TCAAATTATC GAGGTAAACA GCCTGTATTA
CTGGCATTTA CGCGAATTTT TACAGAAAAG CAATATTGTC CCTTTTGCTT TCCTCACATC
AAAGCTTTAA ATGAGAACTA CGAACAATTT ACCAATCGCG GGATAGAAGT TTTATTAGTT
ACGAGTACTG ATGAAAAGCA AAGTCAAATA GTAGTTAAAG ATTTGAGCTT AAAAATGCCT
TTACTTAGTG ATCCGAGTTG TCGGACATTT CGTACCTATC AAGTAGGGCA AGCCTTGGGA
GCGCCTTTAC CAGCCCAATT TGTCTTAGAT AAAGATGGTA GATTGCGTTA CAAGCATTTA
TTTTCGTTTT TTGATCACAA TGCTAGTATC GAGAAATTGT TAGAAAAATT TGATTAA
|
|---|
| Protein sequence | MLTSTDFSGL LNERFFRNFL PIPASNELRL DVGTPDFQLP DITNGTLVKL SNYRGKQPVL
LAFTRIFTEK QYCPFCFPHI KALNENYEQF TNRGIEVLLV TSTDEKQSQI VVKDLSLKMP
LLSDPSCRTF RTYQVGQALG APLPAQFVLD KDGRLRYKHL FSFFDHNASI EKLLEKFD
|
|---|
| |