Gene Ava_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2020 
SymbolglgC 
ID3681292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2501099 
End bp2502388 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content45% 
IMG OID637717364 
Productglucose-1-phosphate adenylyltransferase 
Protein accessionYP_322537 
Protein GI75908241 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0448] ADP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR02091] glucose-1-phosphate adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAAG TCTTAGCAAT TATTCTTGGT GGTGGTGCGG GTACTCGCCT TTACCCACTA 
ACCAAACTCC GCGCTAAACC GGCAGTACCA GTGGCAGGGA AATACCGCCT AATAGATATC
CCTGTCAGTA ACTGCATTAA TTCGGAAATT TTTAAAATCT ACGTATTAAC ACAATTTAAC
TCAGCTTCTC TCAATCGCCA CATTGCCCGT ACCTACAACT TTAGTGGTTT TAGCGAGGGT
TTTGTGGAAG TGCTGGCCGC CCAGCAGACA CCAGAGAACC CTAACTGGTT CCAAGGTACA
GCCGATGCTG TACGTCAGTA TCTCTGGATG TTACAAGAGT GGGACGTAGA TGAATTTTTG
ATCCTGTCAG GAGATCACCT GTACCGGATG GATTATCGCC TATTTATCCA GCGCCATCGA
GAAACCAATG CGGATATCAC ACTTTCCGTA ATTCCCATTG ACGATCGCCG CGCCTCGGAT
TTTGGTTTAA TGAAGATCGA TAACTCTGGA CGAGTCATCG ATTTTAGCGA AAAACCCAAA
GGCGAAGCCT TAACCAAAAT GCGTGTTGAT ACCACCGTTT TAGGCTTGAC ACCAGAACAG
GCAGCATCAC AGCCTTACAT CGCCTCGATG GGGATTTACG TATTTAAAAA AGATGTTTTG
ATCAAACTGT TGAAGGAATC TTTAGAACGT ACTGATTTCG GCAAAGAAAT TATTCCTGAT
GCCTCCAAAG ATCACAACGT TCAAGCTTAC TTATTCGATG ACTACTGGGA AGATATTGGG
ACAATCGAAG CTTTTTATAA TGCTAATTTA GCATTGACTC AGCAGCCCAT GCCGCCCTTT
AGCTTCTACG ACGAAGAAGC ACCAATTTAT ACCCGCGCAC GTTACTTACC ACCCACAAAA
CTATTAGATT GCCACGTTAC AGAATCAATC ATTGGCGAAG GCTGTATTCT GAAAAACTGT
CGCATTCAAC ACTCAGTATT GGGAGTGCGA TCGCGTATTG AAACCGGCTG CGTCATCGAA
GAATCTTTAC TCATGGGTGC CGACTTCTAC CAAGCTTCAG TGGAACGCCA GTGCAGCATT
GACAAAGGAG ACATCCCCGT AGGCATCGGC CCAGATACCA TTATTCGCCG TGCCATCATC
GATAAAAATG CCCGCATCGG TCACGATGTC AAAATTATCA ATAAAGACAA CGTGCAGGAA
GCCGACCGCG AAAGTCAAGG ATTTTACATC CGCAGTGGCA TTGTCGTCGT TCTCAAAAAT
GCCGTCATTA CCGATGGCAC AATAATTTAG
 
Protein sequence
MKKVLAIILG GGAGTRLYPL TKLRAKPAVP VAGKYRLIDI PVSNCINSEI FKIYVLTQFN 
SASLNRHIAR TYNFSGFSEG FVEVLAAQQT PENPNWFQGT ADAVRQYLWM LQEWDVDEFL
ILSGDHLYRM DYRLFIQRHR ETNADITLSV IPIDDRRASD FGLMKIDNSG RVIDFSEKPK
GEALTKMRVD TTVLGLTPEQ AASQPYIASM GIYVFKKDVL IKLLKESLER TDFGKEIIPD
ASKDHNVQAY LFDDYWEDIG TIEAFYNANL ALTQQPMPPF SFYDEEAPIY TRARYLPPTK
LLDCHVTESI IGEGCILKNC RIQHSVLGVR SRIETGCVIE ESLLMGADFY QASVERQCSI
DKGDIPVGIG PDTIIRRAII DKNARIGHDV KIINKDNVQE ADRESQGFYI RSGIVVVLKN
AVITDGTII