Gene Ava_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1984 
Symbol 
ID3681547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2465367 
End bp2465696 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content48% 
IMG OID637717325 
ProductRNA-binding region RNP-1 
Protein accessionYP_322501 
Protein GI75908205 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATTT ACATCGGTAA CTTATCCTAC CAAGTTACAG AGGAAGACCT GAAGCTGGCC 
TTCGCAGAGT ACGGAAAAGT TAGCCGCGTT CAATTACCAA CCGACCGTGA AACTGGCCGT
CCTCGTGGGT TTGCTTTTGT AGAAATGGAA ACAGAAGCTC AAGAAACCGC AGCCATTGAA
GCACTGGATG GTGCTGAATG GATGGGACGT GATTTAAAAG TTAACAAAGC TAAACCCCGT
GAAGAAAGAA GTTCTCCTCG TGGTGGCGGC GGTAGTTGGG GCAATAATAA CCGTGGTGGT
GGCGGCGGTG GTAATCGCCG TAGTTACTAA
 
Protein sequence
MSIYIGNLSY QVTEEDLKLA FAEYGKVSRV QLPTDRETGR PRGFAFVEME TEAQETAAIE 
ALDGAEWMGR DLKVNKAKPR EERSSPRGGG GSWGNNNRGG GGGGNRRSY