Gene Ava_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1977 
Symbol 
ID3681540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2452282 
End bp2452935 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content44% 
IMG OID637717318 
Producthypothetical protein 
Protein accessionYP_322494 
Protein GI75908198 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.183577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTAA AACCAGATCA ACGCTTGAAA TTAGACGATA CAGACGACAA CTTATTTTAT 
GCCTATCCCC GTTTTGTCAC TCATGTGGAT GAAGGTTTTA TTCAACAGTT GACTGATTTA
TATAGAGAGC GATTACAGCC CAACACACGC ATATTAGACA TGATGAGTAG TTGGGTTTCA
CATCTACCAG AAGAGATAAA GTTTGCTCAT GTGGAGGGAC ATGGACTCAA CGCTGAGGAA
CTAGGACGCA ATCCCCAACT TAACCATTAC TTTGTGCAGA ACCTCAACGA AAATCCAGGT
TTACCCCTAC CAGATCAAGA ATTCGATGCA GTTCTCAATT GTGTTTCCGT ACAGTACCTA
CAATATCCAG AAGCAGTATT TTCCGAAATT CACCGCATCC TCAAACCTGG TGGCGTAGCA
ATTATCAGCT TTTCTAACAG AATGTTCTAT CAAAAAGCTA TTCAAGCTTG GCGCGATGCT
TCCGAGCCTG GACGTTTAGA ATTAGTGAAA CGCTACTTCG CCTCAGTACC CGGATTTAGC
ACTCCAGAAA TTATTGCTCG TAAGTCAACA GCACCCAATT TCTTGCAGTG GTTAGGTGCG
CCAGGGGGAG ATCCCTTTTA TGCTGCGATC GCTCATCGAG AAGGCTTCGC CTAG
 
Protein sequence
MLLKPDQRLK LDDTDDNLFY AYPRFVTHVD EGFIQQLTDL YRERLQPNTR ILDMMSSWVS 
HLPEEIKFAH VEGHGLNAEE LGRNPQLNHY FVQNLNENPG LPLPDQEFDA VLNCVSVQYL
QYPEAVFSEI HRILKPGGVA IISFSNRMFY QKAIQAWRDA SEPGRLELVK RYFASVPGFS
TPEIIARKST APNFLQWLGA PGGDPFYAAI AHREGFA