Gene Ava_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1960 
Symbol 
ID3681620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2436436 
End bp2437437 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content44% 
IMG OID637717301 
Productpeptidases M20 and M28 
Protein accessionYP_322477 
Protein GI75908181 
COG category[R] General function prediction only 
COG ID[COG2234] Predicted aminopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0902014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA AACGGATTTG GTTGACATTG TTGGTGCTGG TGGTAGTTGT GATTGTGGGT 
AGTAGGAGCA GCGCTTTTTT TGAACAGCGC TCTTCGCCAG AAATTGTTGA GAGTGCGCCA
GTAGCAACGC CACCGCCACA ACCAGAGTTG CAGGAAGTCA AAGATGAGTT ACAAGTATCT
GTTGATAAAT TATTAGCTCA TATTCAACAG TTAAATTTTC AACGCTATAC AAAAACAGAG
CGATCGCGCA CTCGGACATA TATCATTAAT GAACTGCGAA AATCTGGCTG GACACCAAAG
CTGGAAAAGT TCTCCGGTGG TGTGAATGTG TTTGCTGAAC GTCCAGGGAC TGACAACACA
GGCGACGCAA TTTTAGTAGC AGCTCATTAT GACACTGTAG TCGGTTCTCC TGGTGCAGAT
GATAACGCCA GTGGTGTGGC TGTAATCTTG GAAATCGCCA GACTGTTTGC TTCCCACCCC
ACACCCCGGA CTTTGCAGTT AGCTTTTTTT GACCTTGAGG AAGCCGGACT AGTTGGTAGT
AAAGCTTTTG TCACCAATAC TCAACGCCTG GAAAAACTCC GGGGTGTGAT AGTCATGGAT
ATGGTTGGTT ACGCTTGTTA TACCGCCGGC TGTCAGCAAT ATCCACCGGG ATTACCTGTT
ACCCCACCCA GCGATAAGGG TGATTTTTTA GTAGCCGTCG GCGATATCGA AAATTTGTCT
TTACTCAAAG CTTTTAATCA TGCAGATACA AAAAATCTTC CCAGTGTCTT AACTATACCG
ATTCCTCTGA AAGGTCTACT CACACCAGAT ACACTGCGTA GTGATCATGC TCCATTTTGG
TATCAGGGAA TAGGTGCAGT ATTAGTCACC GATACTGCCA ATTTACGTAC ACCTCATTAT
CATCAACCTA CTGATACACC CAGCAATATT GAGCAAGCAT TTTTTGTTGG TGCAGCGCAA
ATTGTAGTCA ATGCAGTTAA TACTTTGGTC AATAGTCAAT AA
 
Protein sequence
MMKKRIWLTL LVLVVVVIVG SRSSAFFEQR SSPEIVESAP VATPPPQPEL QEVKDELQVS 
VDKLLAHIQQ LNFQRYTKTE RSRTRTYIIN ELRKSGWTPK LEKFSGGVNV FAERPGTDNT
GDAILVAAHY DTVVGSPGAD DNASGVAVIL EIARLFASHP TPRTLQLAFF DLEEAGLVGS
KAFVTNTQRL EKLRGVIVMD MVGYACYTAG CQQYPPGLPV TPPSDKGDFL VAVGDIENLS
LLKAFNHADT KNLPSVLTIP IPLKGLLTPD TLRSDHAPFW YQGIGAVLVT DTANLRTPHY
HQPTDTPSNI EQAFFVGAAQ IVVNAVNTLV NSQ