Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1960 |
Symbol | |
ID | 3681620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2436436 |
End bp | 2437437 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637717301 |
Product | peptidases M20 and M28 |
Protein accession | YP_322477 |
Protein GI | 75908181 |
COG category | [R] General function prediction only |
COG ID | [COG2234] Predicted aminopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0902014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAA AACGGATTTG GTTGACATTG TTGGTGCTGG TGGTAGTTGT GATTGTGGGT AGTAGGAGCA GCGCTTTTTT TGAACAGCGC TCTTCGCCAG AAATTGTTGA GAGTGCGCCA GTAGCAACGC CACCGCCACA ACCAGAGTTG CAGGAAGTCA AAGATGAGTT ACAAGTATCT GTTGATAAAT TATTAGCTCA TATTCAACAG TTAAATTTTC AACGCTATAC AAAAACAGAG CGATCGCGCA CTCGGACATA TATCATTAAT GAACTGCGAA AATCTGGCTG GACACCAAAG CTGGAAAAGT TCTCCGGTGG TGTGAATGTG TTTGCTGAAC GTCCAGGGAC TGACAACACA GGCGACGCAA TTTTAGTAGC AGCTCATTAT GACACTGTAG TCGGTTCTCC TGGTGCAGAT GATAACGCCA GTGGTGTGGC TGTAATCTTG GAAATCGCCA GACTGTTTGC TTCCCACCCC ACACCCCGGA CTTTGCAGTT AGCTTTTTTT GACCTTGAGG AAGCCGGACT AGTTGGTAGT AAAGCTTTTG TCACCAATAC TCAACGCCTG GAAAAACTCC GGGGTGTGAT AGTCATGGAT ATGGTTGGTT ACGCTTGTTA TACCGCCGGC TGTCAGCAAT ATCCACCGGG ATTACCTGTT ACCCCACCCA GCGATAAGGG TGATTTTTTA GTAGCCGTCG GCGATATCGA AAATTTGTCT TTACTCAAAG CTTTTAATCA TGCAGATACA AAAAATCTTC CCAGTGTCTT AACTATACCG ATTCCTCTGA AAGGTCTACT CACACCAGAT ACACTGCGTA GTGATCATGC TCCATTTTGG TATCAGGGAA TAGGTGCAGT ATTAGTCACC GATACTGCCA ATTTACGTAC ACCTCATTAT CATCAACCTA CTGATACACC CAGCAATATT GAGCAAGCAT TTTTTGTTGG TGCAGCGCAA ATTGTAGTCA ATGCAGTTAA TACTTTGGTC AATAGTCAAT AA
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Protein sequence | MMKKRIWLTL LVLVVVVIVG SRSSAFFEQR SSPEIVESAP VATPPPQPEL QEVKDELQVS VDKLLAHIQQ LNFQRYTKTE RSRTRTYIIN ELRKSGWTPK LEKFSGGVNV FAERPGTDNT GDAILVAAHY DTVVGSPGAD DNASGVAVIL EIARLFASHP TPRTLQLAFF DLEEAGLVGS KAFVTNTQRL EKLRGVIVMD MVGYACYTAG CQQYPPGLPV TPPSDKGDFL VAVGDIENLS LLKAFNHADT KNLPSVLTIP IPLKGLLTPD TLRSDHAPFW YQGIGAVLVT DTANLRTPHY HQPTDTPSNI EQAFFVGAAQ IVVNAVNTLV NSQ
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