Gene Ava_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1956 
Symbol 
ID3681616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2432238 
End bp2432903 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content41% 
IMG OID637717297 
Producthypothetical protein 
Protein accessionYP_322473 
Protein GI75908177 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.587355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTAC TGTTAAGCCG GGTACTGCTG TGGCTACTGA TTGGGATTAT TGTCTATTCC 
CTGTTTCAGA GAGTTTATCC TTCCAGTACT TTTGTTGGGC GAATAATCTT AGTTATTATC
TTGGTTGTCT TAGCTTTGTC ATTCATTAAT CCGAATGAAC CAGCTGTGCG ATCGCTCTGG
GATTTAGTAT CCTTTCCCCT CAAACCCTTA GGGGGATCAC TTTTACTGCT GATTTTCGCA
GCCCAAAGAA TTAAAGGCGG TGGTATAGAA AAGCCAGGAG GATATCTTGC CGGTTGGGCA
TTGACGATTC TACTGTTGTC GAGTATGCCA TTCATCAACA AGTTGCTAGG AGGAACCTTA
GCTACCACAT CTGTTTCTCT ACCATCACAA ACCTTAGTAG CCTTGCAGCC ATCAAGCAAT
AATATTACTG ATATTGGAAG CAATATCTTA TACAGTGCGG AATCAGGGCA GACAACAATA
GCTCTCAACT CGTTAAATTC AGAAATTCCC TCCTATTTGT TACAGACTCC TGCCCCTGTA
GCAAATCGGA CAGGTTTAAC TGTGAGTGAC TTTGTACCTA GTGCAGACAC TCTGCAACAA
ACAACAAGAT TTTGGGAAAG TTATCTTAAT CAGATTTATT TTTTCTTACG TGGTCGTCAA
TCATAA
 
Protein sequence
MFLLLSRVLL WLLIGIIVYS LFQRVYPSST FVGRIILVII LVVLALSFIN PNEPAVRSLW 
DLVSFPLKPL GGSLLLLIFA AQRIKGGGIE KPGGYLAGWA LTILLLSSMP FINKLLGGTL
ATTSVSLPSQ TLVALQPSSN NITDIGSNIL YSAESGQTTI ALNSLNSEIP SYLLQTPAPV
ANRTGLTVSD FVPSADTLQQ TTRFWESYLN QIYFFLRGRQ S