| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1952 |
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| Symbol | |
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| ID | 3681612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 2426278 |
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| End bp | 2427558 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637717293 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_322469 |
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| Protein GI | 75908173 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.62212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTTT CTCATCTCGG CTTGTCCAAT GAAATTATTC GTGCTGTTAC TGAGTTGGGG
TACACCAAAC CTACACCAAT CCAGATGCAG TCCATTCCTG CTGTCTTGTC GGGACGTGAC
TTGCTAGCTG GCGCTCAAAC TGGAACTGGG AAAACTGCCA GCTTTACCCT CCCACTGCTA
CATTTATTAT CCCAAGATAG TCTTAAAAGC GCCTCCAGTC CTTCCTCCCC CATTCGGGCG
CTGATTCTCA CCCCGACTCG TGAACTTGCC GCACAGGTGG AATCAAGCGT ACGTGACTAC
GGCAAGTACT TGAACCTCAA CTCAATGGTG ATGTTTGGTG GAGTCAGTAT TAATCCCCAA
AAACAGCGTT TAAAGGGTCG CGTGGATATT TTGGTTGCTA CCCCAGGGCG ACTCCTAGAC
CATGTGCAGC AGGGAACGGT AAACCTTTCA CAGATTGAGA TTCTCGTGCT GGATGAAGCC
GACCGGATGT TAGATATGGG CTTTATTCGT GATATCCGTC GTATCCTCTC TTTGCTGCCC
AAACAGCGAC AAAATTTGCT ATTCTTCGCT ACATTCTCAG ACAAAATCAA GGAACTAGCC
GCCGGTCTGC TAAATCGCCC ACAAATGATT GAAGTAGCAC GCCGTAACGT TACCGCCGAT
ACGGTGACAC AAAAAGTCTA CAAAATAGAG CGCGACAGGA AACGAGATTT ACTTGCTCAC
CTGATTCGGA AAGATAATTG GTATCAAGTA CTAGTATTTA CTCGCACCAA GTATGGTGCT
GACCGCCTGG TGAAACAATT GGGACATGAG CGCATTCAAG CTCTAGCTAT CCACGGCAAT
AAGAGCCAGT CGGCACGTAC CCACGCTCTG GCAAAGTTCA AAAATGGTAG TTTACAAGTT
TTAGTGGCAA CTGATATCGC CGCGCGGGGG CTGGACATCA GCGAATTGCC TTATGTGGTC
AATTTCGATT TGCCCTATGT ACCAGAAGAT TATGTTCATC GCATTGGTCG CACTGGTCGT
GCTGGTGCAT CAGGTGAGGC TGTATCTTTG GTGAGCGCCG ATGAATATCA TTTGTTGGCA
GATATTGAAA AACTGATTGA AAAACGATTG CCTTTTGAAT TGGTAGCGGG TATTGGAGCT
AATTCCCAAA CTAAACCAGA ACCAAGCCAG GATGAACGCA AGCAAAAACC CAAAGATAGT
AAGCATCAGC CTCGCTCTGC TGCTCAAGCT GTGCCAAAGA AATCAGGGAA AAAACGTTTA
ACTAATTCTG GGAAAAGGTA A
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| Protein sequence | MSFSHLGLSN EIIRAVTELG YTKPTPIQMQ SIPAVLSGRD LLAGAQTGTG KTASFTLPLL
HLLSQDSLKS ASSPSSPIRA LILTPTRELA AQVESSVRDY GKYLNLNSMV MFGGVSINPQ
KQRLKGRVDI LVATPGRLLD HVQQGTVNLS QIEILVLDEA DRMLDMGFIR DIRRILSLLP
KQRQNLLFFA TFSDKIKELA AGLLNRPQMI EVARRNVTAD TVTQKVYKIE RDRKRDLLAH
LIRKDNWYQV LVFTRTKYGA DRLVKQLGHE RIQALAIHGN KSQSARTHAL AKFKNGSLQV
LVATDIAARG LDISELPYVV NFDLPYVPED YVHRIGRTGR AGASGEAVSL VSADEYHLLA
DIEKLIEKRL PFELVAGIGA NSQTKPEPSQ DERKQKPKDS KHQPRSAAQA VPKKSGKKRL
TNSGKR
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