Gene Ava_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1951 
Symbol 
ID3681611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2425469 
End bp2426146 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content43% 
IMG OID637717292 
Productsugar transferase 
Protein accessionYP_322468 
Protein GI75908172 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.550997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.384652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAAA CACAATTACA AAGCGTCTTG CAAGGTACTA CTTATAAGGA TTGGGCGTTC 
GGGCTTATGC CCCATCCCTC AGTGCAATCT AAGTTCAAAC GTTGTTTAGA TATTTTAGGC
AGCTTAGTGG GATTGGGAAT TTTAGCGATC GCATTCTTAC CAATTGCGAT CGCGATCAAG
CTCGATAGTC CAGGCCCAAT TTTCTTTTCT CAAGAGCGCT ATGGTTTTCG GGGTCGTCCC
TTCCAAATTT GGAAGTTTCG CTCGATGGTG AACGACGCGG AGAGACTGAA AACCTTAGTA
GATAACGAAG CAGACGGATT GATCTTTAAA AATAAAAACG ATTTTCGGGT AACTAAAGTG
GGGCGTTTAT TGCGTAGTAC TAGCTTAGAT GAACTACCCC AATTCTGGAA CGTCCTCATG
GGTGACATGA GTTTAGTCGG AACACGTCCA CCCACTGCTG ATGAAGTAGC CAAATATAGC
GATCGCCACT GGCAAAGATT AAACGTCAAG CCTGGCTTAA CCGGCGAATG GCAAGTTAAC
GGACGTTCTC ATGTCAAAGA CTTTGAACAG ATAGTAGATT TAGATTTGCA ATATCAAAAT
AATTGGCATC CTCTATACGA CTTGCTACTG ATTGGTAAAA CAATTTACGT TATCGTCGCT
AGAGTTGGAG CCTTCTAA
 
Protein sequence
MYQTQLQSVL QGTTYKDWAF GLMPHPSVQS KFKRCLDILG SLVGLGILAI AFLPIAIAIK 
LDSPGPIFFS QERYGFRGRP FQIWKFRSMV NDAERLKTLV DNEADGLIFK NKNDFRVTKV
GRLLRSTSLD ELPQFWNVLM GDMSLVGTRP PTADEVAKYS DRHWQRLNVK PGLTGEWQVN
GRSHVKDFEQ IVDLDLQYQN NWHPLYDLLL IGKTIYVIVA RVGAF