Gene Ava_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1948 
Symbol 
ID3681667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2422350 
End bp2423399 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content37% 
IMG OID637717289 
Productcobalamin synthesis protein/P47K 
Protein accessionYP_322465 
Protein GI75908169 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.871457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.448238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAC TAACCGCAGA AACAACCAGC ATAATTCCTG AAATTCCCAA ACGAGGAATG 
CCAGTTACAA TCATTACTGG CTTTTTAGGT AGTGGTAAAA CAACTCTACT CAATCAAATT
CTTAAAAATA AGCATGACTT AAAAGTAGCT GTTCTTGTCA ATGAGTTCGG CGATATTAAT
ATTGATAGCC AGTTATTAGT GTCTGTAGAC CAAGATATGC TCGAACTAAG CAATGGTTGT
ATATGCTGCA CTATCAATGA TGGTCTAGTT GATGCTGTTT ATCGGGTTTT GGAACGAGAA
GAACGTATTG ATTATTTAGT TATTGAAACT ACTGGCGTTG CTGACCCATT ACCCATTATT
TTAACATTTT TAGGTACAGA GCTTAGGGAT TTGACAAACC TTGATTCAAT TTTGACGGTT
GTAGATGCGG AAGCTTTTGA ACCAACTCAT TTCGAGAGCG AAGTTGCTTT AAAACAACTT
ACTTATGCAG ATATTATCCT CCTGAACAAA ACAGACTTGG CTACTGCGGA AAAAATTCAA
GCATTAGAAG ACTATATCCA AACTGTCAAA GATAGTGCAA GAATCCTACA TACCAAATAT
GGTGAGGTAG CTTTACCCTT AATTTTAGGT GTTGGCTTAA CCTCAAAAGA TGACTATACA
ACTGATGATG CAGAAGCTCC TCATGAACAT AATCATGAGC ATCATAGCCA AGACCATGAC
CATCATGAGC ATCACCATCT TCATGAACAC CACTCCCATC ATTTAGATAA TGATGGATTT
GTTGCGGTAT CTTTTCAGTC TGATAGACCG TTTGATATTC ATAAATTTGA GAATTTTCTC
ACAGAACAAA TGCCCCAGAA TGTGTTCCGA GCTAAGGGTA TTTTGTGGTT TAGTGATAGT
GAGTTACGCC ATATATTTCA ACTGAGTGGG CCTCGTTATA ACTTACACGC CGATGAATGG
CATACTTTAC CAAAGAACCA ATTAGTTTTT ATTGGTAGAA AATTGGAGAC TCAGCAAATT
TATACACAAC TTAACAATTG TTTGATATGA
 
Protein sequence
MNTLTAETTS IIPEIPKRGM PVTIITGFLG SGKTTLLNQI LKNKHDLKVA VLVNEFGDIN 
IDSQLLVSVD QDMLELSNGC ICCTINDGLV DAVYRVLERE ERIDYLVIET TGVADPLPII
LTFLGTELRD LTNLDSILTV VDAEAFEPTH FESEVALKQL TYADIILLNK TDLATAEKIQ
ALEDYIQTVK DSARILHTKY GEVALPLILG VGLTSKDDYT TDDAEAPHEH NHEHHSQDHD
HHEHHHLHEH HSHHLDNDGF VAVSFQSDRP FDIHKFENFL TEQMPQNVFR AKGILWFSDS
ELRHIFQLSG PRYNLHADEW HTLPKNQLVF IGRKLETQQI YTQLNNCLI