Gene Ava_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1946 
Symbol 
ID3681665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2420860 
End bp2421870 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content46% 
IMG OID637717287 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_322463 
Protein GI75908167 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTTG AAAATCCATC TACCGCCAAA CCATTGAACC TGCTTCAACG CCCCCGTCGG 
TTGCGTCGGA CTGTAACACT GAGGCGGATG GTGCGGGAAA CTACCCTGAC AGTGGATGAT
TTGATTTATC CGATGTTTGT CATGGAAGGA GAGGGGCAAA AAGTAGAAAT TGCTTCTATG
CCTGGATGTT ATCGTTACTC CCTAGATTTG TTGCTCAAAG AGATAGCCGA AGTATCACAG
CTAGGAATTA AGGCGATCGC ACTTTTCCCT GTCATCTCCG AAAATAAAAA AGATGATATC
GGTGCAGAAA GTTACAATCC AGATGGGTTA GTACAGCAAA CAGTCAAAGC CATTAAACAA
GCAGTTCCCG ACATTGTTAT TATCACCGAC GTAGCCCTTG ACCCCTTCAC CACACATGGA
CATGATGGTT TAGTTGCTGA AAACGGCACA ATCTTAAATG ACCCCACTGT GGAAGTGTTA
GTGAAAATGG CACTTTCCCA AGCCGCCGCC GGTACAGATT TTGTCGCCCC TTCCGACATG
ATGGATGGCA GAATTGGCGC AATCCGTCAA GCCTTAGATG CAGAAGGCTA CGTTCATGTA
GGAATTTTGG CATACTCCGC TAAATACGCC TCTGCCTATT ACGGCCCCTT TCGAGATGCG
TTAGATTCTG CCCCCAAATT TGGCGACAAA AAGACTTATC AAATGGACGC AGCCAACGCT
AGAGAAGCAA TTAAAGAAGT AGAACTAGAT ATTGCCGAAG GTGCAGATAT TGTTATGGTA
AAACCTGCCC TGGCATATCT AGATATCATT TATCAAGTCC GTCAAGCCAC CCAGTTACCA
GTTGCAGCCT ACAACGTCAG TGGCGAATAT GCCATGATCA AAGCTGCGGC TCAAATGGGT
TGGATTGATG AAAAACAAGT GATTTTGGAA TCTTTAACCA GCATGAAACG CGCCGGCGCA
GATTTAATTC TCACCTACTT TGCCAGAGAA GTAGCACTGA TGTTGCTTTA A
 
Protein sequence
MSVENPSTAK PLNLLQRPRR LRRTVTLRRM VRETTLTVDD LIYPMFVMEG EGQKVEIASM 
PGCYRYSLDL LLKEIAEVSQ LGIKAIALFP VISENKKDDI GAESYNPDGL VQQTVKAIKQ
AVPDIVIITD VALDPFTTHG HDGLVAENGT ILNDPTVEVL VKMALSQAAA GTDFVAPSDM
MDGRIGAIRQ ALDAEGYVHV GILAYSAKYA SAYYGPFRDA LDSAPKFGDK KTYQMDAANA
REAIKEVELD IAEGADIVMV KPALAYLDII YQVRQATQLP VAAYNVSGEY AMIKAAAQMG
WIDEKQVILE SLTSMKRAGA DLILTYFARE VALMLL