Gene Ava_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1945 
Symbol 
ID3681664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2419628 
End bp2420743 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content44% 
IMG OID637717286 
Productperiplasmic sensor Signal transduction histidine kinase 
Protein accessionYP_322462 
Protein GI75908166 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACA AAGGTTGGCG TTGGACAAAA TCCCTACCTT TAGCATCTCG CTTGTTTGTC 
TCCCATTTAG TGGTGATGAT AGTGGGATTA ATTAGTCTGG TGATTATCAG TAGAGTTTCG
TCACCGCGCT TTTTTGTCCT GCACCTAGAA AGATTGGAAA GTGAAGGGGT AAATTTAATC
AATGTTCGTG CAGATTTAGT CCAAGGGTTC GAGATTGCTT GGCGCAGTAG CACTATTTGG
TCAGTTTTAG TCGGTAGCAC GGCTGCGGGA GGCTTGAGTT ACTGGGTTTC TAAACGGATT
ATGCAGCGAT TAACTGAGAT GGAACAAATC ACTCAACAGT TTGCTGCTGG TCATCTACAA
GCGCGACTAC CTTTGTCTGA CATCCCCGAA CTCAATCGCT TGGGTACGAG TTTTAACCGC
ATGGCTGCAA GTTTGGAAGG GGTGGAAGCA CGCCGACGGG AACTCATAGG AGATATGACT
CATGAACTAC GCACACCGTT AACAGTTGTG CGTGGTTATT TAGAAGAACT CGCCGATGGT
GAAATTGAAC CGTCCCCAGA GGTTTATCGG CGCTTGGCGA AAGAGACTAA ACGTTTAGAA
CGATTGGTCA ATGATTTACA AGAATTATCG AAGGCAGAAG CTGGTTATTT ACCGATTAGA
ATACAGTCAG TAAATCTATA TCCTTTATTA GAGTCTTTAG TAGAAAGATT TAGTGATCAA
TTGTTGGAGG ATGGGCCAGT ATTACTTGCA GAATTTACAC CCCAAATCCC CCTTGTACTA
GCAGATATCG ATCGCACAGA ACAAATATTA GTCAACTTGC TAGGTAACGC CATCCGTTAT
ACCGTCAAAG GCTCAATTAC CATCCGTACA TGGGCTGAAA ACAGGCAACT CTGGATTGCC
GTGATTGATA CAGGGATTGG TATTGCCTCA GAGGATATAC CTCATGTATT TGAGCGCTTT
TGGCGAGCTG ATCAATCACG CGATCGCCAT TCCGGTGGCA CAGGTATTGG CTTAACTATC
ACTAAACACC TAGTAGAACT ACAAGGTGGC GAAATTCACT TAGATAGTGA ACTTGGTATT
GGCAGCACTT TCCGATTTTG TTTGCCTCTA GCATAA
 
Protein sequence
MINKGWRWTK SLPLASRLFV SHLVVMIVGL ISLVIISRVS SPRFFVLHLE RLESEGVNLI 
NVRADLVQGF EIAWRSSTIW SVLVGSTAAG GLSYWVSKRI MQRLTEMEQI TQQFAAGHLQ
ARLPLSDIPE LNRLGTSFNR MAASLEGVEA RRRELIGDMT HELRTPLTVV RGYLEELADG
EIEPSPEVYR RLAKETKRLE RLVNDLQELS KAEAGYLPIR IQSVNLYPLL ESLVERFSDQ
LLEDGPVLLA EFTPQIPLVL ADIDRTEQIL VNLLGNAIRY TVKGSITIRT WAENRQLWIA
VIDTGIGIAS EDIPHVFERF WRADQSRDRH SGGTGIGLTI TKHLVELQGG EIHLDSELGI
GSTFRFCLPL A