Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1945 |
Symbol | |
ID | 3681664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2419628 |
End bp | 2420743 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637717286 |
Product | periplasmic sensor Signal transduction histidine kinase |
Protein accession | YP_322462 |
Protein GI | 75908166 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAACA AAGGTTGGCG TTGGACAAAA TCCCTACCTT TAGCATCTCG CTTGTTTGTC TCCCATTTAG TGGTGATGAT AGTGGGATTA ATTAGTCTGG TGATTATCAG TAGAGTTTCG TCACCGCGCT TTTTTGTCCT GCACCTAGAA AGATTGGAAA GTGAAGGGGT AAATTTAATC AATGTTCGTG CAGATTTAGT CCAAGGGTTC GAGATTGCTT GGCGCAGTAG CACTATTTGG TCAGTTTTAG TCGGTAGCAC GGCTGCGGGA GGCTTGAGTT ACTGGGTTTC TAAACGGATT ATGCAGCGAT TAACTGAGAT GGAACAAATC ACTCAACAGT TTGCTGCTGG TCATCTACAA GCGCGACTAC CTTTGTCTGA CATCCCCGAA CTCAATCGCT TGGGTACGAG TTTTAACCGC ATGGCTGCAA GTTTGGAAGG GGTGGAAGCA CGCCGACGGG AACTCATAGG AGATATGACT CATGAACTAC GCACACCGTT AACAGTTGTG CGTGGTTATT TAGAAGAACT CGCCGATGGT GAAATTGAAC CGTCCCCAGA GGTTTATCGG CGCTTGGCGA AAGAGACTAA ACGTTTAGAA CGATTGGTCA ATGATTTACA AGAATTATCG AAGGCAGAAG CTGGTTATTT ACCGATTAGA ATACAGTCAG TAAATCTATA TCCTTTATTA GAGTCTTTAG TAGAAAGATT TAGTGATCAA TTGTTGGAGG ATGGGCCAGT ATTACTTGCA GAATTTACAC CCCAAATCCC CCTTGTACTA GCAGATATCG ATCGCACAGA ACAAATATTA GTCAACTTGC TAGGTAACGC CATCCGTTAT ACCGTCAAAG GCTCAATTAC CATCCGTACA TGGGCTGAAA ACAGGCAACT CTGGATTGCC GTGATTGATA CAGGGATTGG TATTGCCTCA GAGGATATAC CTCATGTATT TGAGCGCTTT TGGCGAGCTG ATCAATCACG CGATCGCCAT TCCGGTGGCA CAGGTATTGG CTTAACTATC ACTAAACACC TAGTAGAACT ACAAGGTGGC GAAATTCACT TAGATAGTGA ACTTGGTATT GGCAGCACTT TCCGATTTTG TTTGCCTCTA GCATAA
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Protein sequence | MINKGWRWTK SLPLASRLFV SHLVVMIVGL ISLVIISRVS SPRFFVLHLE RLESEGVNLI NVRADLVQGF EIAWRSSTIW SVLVGSTAAG GLSYWVSKRI MQRLTEMEQI TQQFAAGHLQ ARLPLSDIPE LNRLGTSFNR MAASLEGVEA RRRELIGDMT HELRTPLTVV RGYLEELADG EIEPSPEVYR RLAKETKRLE RLVNDLQELS KAEAGYLPIR IQSVNLYPLL ESLVERFSDQ LLEDGPVLLA EFTPQIPLVL ADIDRTEQIL VNLLGNAIRY TVKGSITIRT WAENRQLWIA VIDTGIGIAS EDIPHVFERF WRADQSRDRH SGGTGIGLTI TKHLVELQGG EIHLDSELGI GSTFRFCLPL A
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