Gene Ava_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1934 
Symbol 
ID3681653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2403972 
End bp2404643 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content41% 
IMG OID637717275 
Producthypothetical protein 
Protein accessionYP_322451 
Protein GI75908155 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0135128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAC AAAAAGCCCC CAGCCAAAGA ACTACAGTTA AACGCGTACC TAAAAGAGCT 
AACTACGAAA GTGAAACTAT TTATCAAATT TTAGATGAAG GATTAGTCTG TCATGTAGGT
TTTGTGGCTG ATGGACAGCC TGTTGTGATT CCTACAGCCT ATGGAAGAAT AGACGATACA
TTATATATTC ACGGGTCACC TGCTAGCCGG ATGTTAAAAA CCCTGCAACA AGGTCTTGAT
ATCTGCGTCA CAGTCACCTT AATTGATGGG TTAGTCTTAG CGCGATCAGC GTTTCACCAC
TCTATGAACT ATCGCTCAGT GGTAGTATTT GGTAAAGCCA CACTAGTAGA AGATACAGAG
CAAAAATTAG CTGCTCTCAA AGCATTTACA GAACACGTTA TTCTAGGGAG GTGGGAAGAA
GTGCGATCGC CTAATCGTCA AGAATTAGCA GGAACTCTAG TACTATCTCT ACCTCTAACA
GAAGCTTCAG CAAAAATCCG CACTGGTGAA CCAATTGACG ATGAAGCAGA TTATCAAATA
CCAGTCTGGG CAGGACAAAT TCCTTTAAAA TTAACTGCGG CTACACCTAT AAATGATTCC
CGCTTAGATT CAAGCATAGA ATTACCTGTA TATGTAAAGA AGTACACTAG ACCACAAAAA
GGTGCTGCGT GA
 
Protein sequence
MTQQKAPSQR TTVKRVPKRA NYESETIYQI LDEGLVCHVG FVADGQPVVI PTAYGRIDDT 
LYIHGSPASR MLKTLQQGLD ICVTVTLIDG LVLARSAFHH SMNYRSVVVF GKATLVEDTE
QKLAALKAFT EHVILGRWEE VRSPNRQELA GTLVLSLPLT EASAKIRTGE PIDDEADYQI
PVWAGQIPLK LTAATPINDS RLDSSIELPV YVKKYTRPQK GAA