Gene Ava_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1896 
Symbol 
ID3681770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2355127 
End bp2356278 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content46% 
IMG OID637717237 
Productdeoxyhypusine synthase-like protein 
Protein accessionYP_322413 
Protein GI75908117 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1899] Deoxyhypusine synthase 
TIGRFAM ID[TIGR00321] deoxyhypusine synthase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0708136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC ATTTGGGTAA GAAAATTGCA CCTATACCGA TGTCAACAGA TATCAGTGTG 
GTGGATTTGA TTGATAATTA CTTCACCGCC TACAACTCAG CACGTTTGCG GGAAGCCAGC
CAATTATTGG CTTGTGATAT CCTCAAAGAT GGTGTGACTG TGGGTGTAAG TCTTTCCGGT
GCGATGACAC CTGCCGGTTT TGGCGTGTCT GCACTTGCGC CCCTAATTCG TAATGGCTTT
ATTGATTGGA TGATTAGCAC TGGTGCAAAT CTTTACCATG ATATGCACTA CGGGTTAGGT
TTTGAGTTGT TTGCTGGGAA CCCGTTTTTA GATGATGTCA AGCTGCGTGA AGAAGGGACT
ATCAGAATTT ACGACATCAT CTTTGGTTAC GATGTCCTGC TAGAAACTGA CGCTTTCATC
CGCAAGATTT TGCAAGCAGA ACCCTTTCAA AAACGGATGG GAACGGCGGA GTTTCATTAT
CTTTTGGGTA AGTATGTGAG AGAAGTTGAA AAGCAATTAG GGGTGAAACA TTCCTGCTTG
CTGGCTACAG CTTATGAGTA TGGCGTACCC ATTTACACAT CTTCCCCTGG TGACAGTTCC
ATCGGGATGA ACGTAGCGGC GTTGGCGTTG GAAGGTTCCC AACTAGTATT AGATCCAGCC
ATTGACGTGA ACGAAACAGC TGCGATCGCC TACAATGCCA GAGAAGGAGA AGGCAAAAGT
GCGGCTGTAA TTCTTGGTGG TGGTAGTCCG AAAAACTTTT TGCTACAAAC CCAACCGCAG
ATTCACGAAG TTTTGGGTTT AGAAGAACGG GGACATGATT TCTTCGTTCA ATTCACAGAT
GCGCGTCCTG ATACTGGTGG CTTATCTGGA GCGACACCAG CAGAAGCAGT AAGCTGGGGT
AAGATCGACC CAGACGAACT ACCCAGCACC ATTGTTTGTT ACACAGATAG CACGATCGCC
TTACCTTTGG TAACAGCATA CATCCTCAAT CAATGCCCAC CCCGTCCTCT GAAGCGGTTG
TATGACAGAC GGGAAGAATT ATACGATAAA CTCCGCACAG ACTACCTAGC AGCGAAAGAT
CAACCAGTAG AGAAAGTAGC AACCAACGGA GAAGTTGCTA CTTATCCCTG TGGTACACCT
ATTAGGCAAT AG
 
Protein sequence
MAKHLGKKIA PIPMSTDISV VDLIDNYFTA YNSARLREAS QLLACDILKD GVTVGVSLSG 
AMTPAGFGVS ALAPLIRNGF IDWMISTGAN LYHDMHYGLG FELFAGNPFL DDVKLREEGT
IRIYDIIFGY DVLLETDAFI RKILQAEPFQ KRMGTAEFHY LLGKYVREVE KQLGVKHSCL
LATAYEYGVP IYTSSPGDSS IGMNVAALAL EGSQLVLDPA IDVNETAAIA YNAREGEGKS
AAVILGGGSP KNFLLQTQPQ IHEVLGLEER GHDFFVQFTD ARPDTGGLSG ATPAEAVSWG
KIDPDELPST IVCYTDSTIA LPLVTAYILN QCPPRPLKRL YDRREELYDK LRTDYLAAKD
QPVEKVATNG EVATYPCGTP IRQ