| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1893 |
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| Symbol | carB |
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| ID | 3681767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 2349382 |
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| End bp | 2352675 |
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| Gene Length | 3294 bp |
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| Protein Length | 1097 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637717234 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_322410 |
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| Protein GI | 75908114 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.457655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCC GTCAAGACAT CCAGAAGATA TTATTATTGG GATCTGGCCC AATTGTGATC
GGACAAGCCT GTGAGTTTGA TTACTCCGGG ACTCAAGCCT GTAAAGCACT GCGAGAAGAA
GGTTATGAAG TAGTGCTGGT GAATTCCAAT CCTGCGACCA TCATGACCGA TCCGGAAACA
GCCGATCGCA CTTACATTGA ACCACTAACA CCGGAATTAG TAGAAAAAGT CATTGCTAGA
GAACGTCCAG ACGCTTTACT ACCCACAATG GGTGGACAAA CTGCCTTAAA TATCGCTGTT
GCTTTAGCAA AAAATGGCGT ACTGGATCAG TATAACGTTG AATTAATCGG TGCTAAGTTA
CCGGCAATTG AGAAAGCCGA AGACCGCAAA CTATTCAATG AAGCAATGGA TAAGATTGGG
GTAAAAGTTT GCCCCAGTGG TACAGCCTCA TCCTTAGACG AAGCTAAAGC GATCGCCCGT
CGCATCGGCA CTTATCCTTT AATTATTCGC CCTGCTTTTA CTATGGGTGG TACGGGTGGT
GGTATTGCGT ACAACCAAGA AGAATTTGAG GAAATGGCGC AAGTCGGGAT AGATGCAAGT
CCCGTTTCCC AAATTCTTAT CGACCAGTCC CTACTCGGCT GGAAAGAATA CGAGTTGGAG
GTGATGCGCG ACCTTGCAGA TAACGTTGTA ATTATCTGTT CCATCGAAAA TATCGACCCG
ATGGGTATCC ACACAGGCGA TTCTATCACC GTCGCCCCCG CCCAAACTCT CACCGATAAG
GAATACCAAC GCCTGCGGGA TATGGCGATT AAAATCATCC GTGAGATTGG CGTAGAAACT
GGTGGTTCTA ATATTCAGTT TGCGGTGAAT CCGGTAAATG GGGATGTGGT TGTCATTGAA
ATGAACCCCC GCGTTTCCCG CAGTTCGGCT TTGTCTTCCA AAGCCACTGG TTTCCCCATT
GCCAAAATGG CTGCTAAGTT AGCTGTGGGC TACACCTTGG ATGAAATTAG AAACGATATC
ACCAAGAAAA CCCCTGCATC CTTTGAACCG ACAATTGATT ACGTTGTTAC CAAAGTTCCC
CGCTTCGCCT TTGAGAAATT CCCTGGTTCC GAACCAGTCC TGACTACCCA AATGAAATCC
GTCGGGGAAG CAATGGCTAT CGGTCGGACT TTTAACGAAT CCTTCCAAAA AGCCCTGCGT
TCCCTAGAAA CAGGCCGGGC TGGTTGGGGT TGCGACAAAG CCGAAAAATT ACCTAGTGGT
GAACAAATTC GCGCCCAACT GCGGACACCA AACCCAGACC GGATTTTTGC AGTGCGTCAT
GCGTTGCAAT TAGGGATGAG TCCGGAAGAA ATCTACGAAC TCACCGCCAT TGACCCTTGG
TTCCTAGATA AAATGCAGCA ACTGTTAGAG GTGGAAAAAT TCCTCAAGCG CACACCTCTC
AAACAGTTGA CGCGAGAGCA GATGTATGCA GTCAAACGGG ATGGTTATAG CGATCGCCAA
ATTGCCTTTG CCACCAAAAC CACAGAAGAT GAAGTCCGCG CCTACCGCAA AGAATTAGGA
GTTACCCCCG TTTACAAAAC CGTCGATACC TGCGCGGCTG AATTTGAAGC GTTTACACCC
TATTACTACT CCACCTACGA AGAAGAAACC GAAGTTATCC CCGCCAGCAA ACCCAAAGTG
ATGATTTTGG GCGGTGGCCC CAACCGCATC GGTCAGGGAA TCGAGTTTGA CTATTGTTGT
TGTCACGCCG CCTATGCACT CAAAGGGGCT GGTTATGAAA CAATCATGGT CAACTCCAAC
CCAGAGACAG TATCCACCGA TTATGACACC AGCGATCGCC TATACTTTGA ACCCTTAACC
AAAGAAGATG TCCTCAACAT CATCGAAGCT GAAAACCCCG TAGGGATAAT TGTCCAATTT
GGCGGACAAA CACCGTTGAA GTTAGCATTG CCTTTACAGG AATATCTCAG GCAGGTAGGG
AATGGGTCAT TGGTAATCGG TAATGGGAAT GAAGAAACGG CAATTACCAA AATTTGGGGT
ACTTCCCCCG ACTCAATCGA CAGCGCCGAA GACCGGGAAA GATTTGAGAA AATCCTCCAA
CAGTTGAATA TTTCCCAACC ACCAAACGGA ATTGCCCGGA GTTACGAAGA TGCACTGATT
GTTGCCAAGC GTATTGGTTA CCCGGTGGTG GTGCGTCCGA GTTATGTCTT GGGTGGTAGG
GCGATGGAAA TTGTCTACTC CGATGCAGAA TTGGAACGCT ACATGACCTT TGCGGTGCAG
GTAGAACCAG AACACCCAAT TTTAATCGAC AAGTTCCTCG AAAATGCCAT TGAAGTTGAT
GTGGATGCGA TCGCCGACCA TACAGGACGT GTCGTGATTG GTGGCATCAT GGAACACATC
GAACAAGCGG GTATTCACTC AGGAGATTCC GCTTGTTCTC TACCTTCGAT TTCCCTCCCA
CCAGCCGTTC TCAATCAAAT TCGTAGTTGG ACAGTACAAC TAGCACAGGC GCTTTCCGTA
GTGGGATTGA TGAATATTCA GTTCGCCGTT GTTGGTGCTA GTTCTTACTC ACCCCAAGTT
TATATTTTGG AAGCCAATCC CCGCGCCTCT CGGACTGTAC CTTTTGTATC CAAAGCCACT
GGTATATCTT TGGCAAAATT GGCATCCTTG ATTATGTCGG GAAAAACCTT GGAAGAGTTA
AACTTTACCC AAGAAGTTAT CCCTAGCCAC ATTGCCGTCA AAGAAGCTGT ATTACCCTTT
AATAAATTCC CCGGAACTGA TACAATCTTA GGCCCAGAGA TGCGTTCCAC TGGCGAGGTA
ATGGGAATCG ACAGCGACTT TGGTCGCGCC TTCGCCAAAG CAGAATTAGG TGCTGGAGAA
CGTCTGCCAC TAACAGGAAC AGTCTTTGTC TCGATGAGCG ATCGCGATAA ATCCGCCGCC
GTATCTGTAG TTAGGGAATT TATCGACTTA GGCTTTAAAG TGATGGCTAC CTTTGGTACG
CGTCGAGTTT TGTTAGAAAA CGGCTTGAAT GTGGAATTAG TCTTGAAACT TCATGAAGGC
CGTCCCCACG TCATCGATGC CATCAAAAAT CAAAAAATCC AGCTGATTAT TAACACACCT
TCTGGAGAAG AAGCACAAAC TGATGCCAGA TTAATCCGCC GGACAGGTCT AGCGTATAAA
ATCCCCATCA TCACCACTAT CGCTGGGGCT AAAGCAACTG TCGCAGCCAT CCGTTCTATG
CAAAATACCA CCTTGGACGT AAAAACCATC CAAGAGTATT GCCCGAATTT CTAG
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| Protein sequence | MPRRQDIQKI LLLGSGPIVI GQACEFDYSG TQACKALREE GYEVVLVNSN PATIMTDPET
ADRTYIEPLT PELVEKVIAR ERPDALLPTM GGQTALNIAV ALAKNGVLDQ YNVELIGAKL
PAIEKAEDRK LFNEAMDKIG VKVCPSGTAS SLDEAKAIAR RIGTYPLIIR PAFTMGGTGG
GIAYNQEEFE EMAQVGIDAS PVSQILIDQS LLGWKEYELE VMRDLADNVV IICSIENIDP
MGIHTGDSIT VAPAQTLTDK EYQRLRDMAI KIIREIGVET GGSNIQFAVN PVNGDVVVIE
MNPRVSRSSA LSSKATGFPI AKMAAKLAVG YTLDEIRNDI TKKTPASFEP TIDYVVTKVP
RFAFEKFPGS EPVLTTQMKS VGEAMAIGRT FNESFQKALR SLETGRAGWG CDKAEKLPSG
EQIRAQLRTP NPDRIFAVRH ALQLGMSPEE IYELTAIDPW FLDKMQQLLE VEKFLKRTPL
KQLTREQMYA VKRDGYSDRQ IAFATKTTED EVRAYRKELG VTPVYKTVDT CAAEFEAFTP
YYYSTYEEET EVIPASKPKV MILGGGPNRI GQGIEFDYCC CHAAYALKGA GYETIMVNSN
PETVSTDYDT SDRLYFEPLT KEDVLNIIEA ENPVGIIVQF GGQTPLKLAL PLQEYLRQVG
NGSLVIGNGN EETAITKIWG TSPDSIDSAE DRERFEKILQ QLNISQPPNG IARSYEDALI
VAKRIGYPVV VRPSYVLGGR AMEIVYSDAE LERYMTFAVQ VEPEHPILID KFLENAIEVD
VDAIADHTGR VVIGGIMEHI EQAGIHSGDS ACSLPSISLP PAVLNQIRSW TVQLAQALSV
VGLMNIQFAV VGASSYSPQV YILEANPRAS RTVPFVSKAT GISLAKLASL IMSGKTLEEL
NFTQEVIPSH IAVKEAVLPF NKFPGTDTIL GPEMRSTGEV MGIDSDFGRA FAKAELGAGE
RLPLTGTVFV SMSDRDKSAA VSVVREFIDL GFKVMATFGT RRVLLENGLN VELVLKLHEG
RPHVIDAIKN QKIQLIINTP SGEEAQTDAR LIRRTGLAYK IPIITTIAGA KATVAAIRSM
QNTTLDVKTI QEYCPNF
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