Gene Ava_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1882 
Symbol 
ID3681795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2335095 
End bp2336381 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content40% 
IMG OID637717223 
Productparallel beta-helix repeat-containing protein 
Protein accessionYP_322399 
Protein GI75908103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.640976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA ATCCAGTCAG AAATATTTGC TTGGTCGTGG TTACTGCTTT GACCTTCACC 
GCAGTGTCTT CAGGGGAAAT CGGCAAAGCG CAAATATCAG GCAAAACCTA CTACGTAGAC
CAAGGTACTG GGAGTGATTA TAACTCTGGC ACAACGCAAA CATCTGCATT TAAGACGATA
AACAAAGCTA ATCAAATAGT AGCGGCTGGT GATACGATCT ACGTAAAAAA CGGAACCTAT
CAAGAAAATA TTACAGTCAA GAAGTCGGGA ACACCAGATA AATGGATATC ATTGCAGGCT
TATCCAGGAC AAACCCCGAA AGTAAGAGGA ACTCAAGATG GCAGTATTAG CGTAGAGGGG
AGTTACGTCA AAGTTATTGG TTTTGATGTG ACTTCAAGCG GAGAAGGGTC TGCTATTAAT
GTTGGTAGAG GCAACCATCA CGTACACATC ATTCGCAATA TAGTCCATGA TTCTGGATGT
GGTGGTATTT CTGCTCAAGA AACAGACTAT TTAACCATTG AAGAGAACAT TTCTTATCGC
AATGCCTTCC GGTCTGGGTA TATGTGTTCG GGAATTTCTA TTTATCAAGC CAAAGCCTTT
GATGATGCCC CTGGATTTCA CAACATCATT AGGGGGAATA TTTCTTACGC TAATGAAAAT
AAAGTTACCA CATCTTGGGG AGGGAGAAGT TTTGTTACCG ATGGTAATGG AATTATTATC
GACGATTTTA GGCAAACACA AAGCCAGAGA TTTAGACCAC GGTACACACC TTGGACTTTA
ATTGAAAACA ACATTGTTTT TAACAACGGT GGCAGAGGCA TCCATATCTA TGAAAGCGAC
AATGTAGTAG TCAGGAATAA TACAGCTTTC AAAAACTTAA GGTCTGGGAA TTTAGATGGT
CACCTAAATG GTGAACTAAC TACGTATTTC TCCAGTAATA TCCACTTTTA CAATAACATA
GCCTATTCCA GTAGTCTAAA TAAGAAAACA TTTGTGGATG ATTATTCATC GAAAAATCGG
TGGGACAATA ACTTGTCATA CATTGGTTCT ACTCTGGTTA ACGATGGACA TTCTGATGTT
AAATTGGGTG CAAATAACCG CATCAACGTT AATCCTCTAT TTATCAATGC TTCTACTGAC
CCTAAACTAG CCAACTTCCG ACTTAATCTT GGTAGTCCAG CCATTGATTC AGGTACTACA
CAAAGTGCAG CTAGTGTTGA TTTTGACAAG AATGCAAGAC CTTTTGGCGT AGGGCCTGAC
ATGGGTGCAT TTGAGTTACG CAGATAA
 
Protein sequence
MTKNPVRNIC LVVVTALTFT AVSSGEIGKA QISGKTYYVD QGTGSDYNSG TTQTSAFKTI 
NKANQIVAAG DTIYVKNGTY QENITVKKSG TPDKWISLQA YPGQTPKVRG TQDGSISVEG
SYVKVIGFDV TSSGEGSAIN VGRGNHHVHI IRNIVHDSGC GGISAQETDY LTIEENISYR
NAFRSGYMCS GISIYQAKAF DDAPGFHNII RGNISYANEN KVTTSWGGRS FVTDGNGIII
DDFRQTQSQR FRPRYTPWTL IENNIVFNNG GRGIHIYESD NVVVRNNTAF KNLRSGNLDG
HLNGELTTYF SSNIHFYNNI AYSSSLNKKT FVDDYSSKNR WDNNLSYIGS TLVNDGHSDV
KLGANNRINV NPLFINASTD PKLANFRLNL GSPAIDSGTT QSAASVDFDK NARPFGVGPD
MGAFELRR