Gene Ava_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1881 
Symbol 
ID3681794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2332863 
End bp2333381 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content40% 
IMG OID637717222 
Producthypothetical protein 
Protein accessionYP_322398 
Protein GI75908102 
COG category[S] Function unknown 
COG ID[COG2839] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.575492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTC TCTATTGGCT ACTTATTGCC TTAATGCTTG TAGGTGTTGT TGGTGCAGTA 
GTTCCTGCTA TCCCTGGAAC CAGTTTAATT TTAATTGCCA TTATCATTTG GGGAATTGTG
AGTAGTTCTT TTGCCGCGAT TAAAATTCCC TTGATTGTGA CAGTTATTGT CTTGATTTTG
AGTATTGGTG TTGATTTTTT AGCTGGGTAC TTGGGTGCAA AACAAGCAGG TGCTAGCAAG
TGGGGTCAAA TTGGCGCATT TGTAGGTTTG TTGCTAGGAT TTTTCGGATT ATTACCCGCT
TTACCTTTTG GCGGCCCACT GTTGGGGATT TTATTCGGGC CGTTGGTAGG TGCGATTATT
GGTGAGTATA TTTACCAAAG GGAATTTTGG TTGGCTGTGA AAGCTGGTAT TGGTATTGTT
GTCGGTACGT TGGTAGGAAA TTTAATACAA GGGGTTTTGG CGATCGCTAC AGTTGCAGTA
TTTTTATTTA CAACCTGGCC ACAAGTATTT GGTAATTAA
 
Protein sequence
MQILYWLLIA LMLVGVVGAV VPAIPGTSLI LIAIIIWGIV SSSFAAIKIP LIVTVIVLIL 
SIGVDFLAGY LGAKQAGASK WGQIGAFVGL LLGFFGLLPA LPFGGPLLGI LFGPLVGAII
GEYIYQREFW LAVKAGIGIV VGTLVGNLIQ GVLAIATVAV FLFTTWPQVF GN