| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1880 |
|---|
| Symbol | |
|---|
| ID | 3681793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 2332165 |
|---|
| End bp | 2332818 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637717221 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_322397 |
|---|
| Protein GI | 75908101 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.57305 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAATAA CACAGCCACC GGCAGAAACA AGAACTTTGC TCAAAAACAT TAGTTGGCAG
ACCTTCAAGG CAATTCTGGC AGATATGGGA AATGAACGAA ATTCTAGGTT TGCCTATGAC
AGAGGAATAG TGGAAATCAT GACTCCACTC ATGCCGCATG AGAACTTTAA TCGCCTGATA
GAAGGCTTTA TTATCGTGCT GTGTGAAGAA TTTAGTTTAG AAGTAAAAAG TACAGGCTCA
CTTACATTAA CACGAGACGA TTTAGAAAAA GGCGGAGAGC CAGATAGTAG TTATTATATT
CAGAATGAAT TTTTAATTAG AGATAAAGAA AATATTGATT TAGCTCACGA TCCACCACCA
GATTTAGTAC TAGAAGTAGA TTATTCTAGA CCTAAAATTA ATAAATTATC TCTTTATGCC
TCAATGGCTA TTCCTCAGTT TTGGAAATAC AACGGAACTG TATTACAAAT TTATAGTCTT
TCAGGTAATG AGTATATAGA AGTTGAGTTT AGTCCCACTT TTGTGCCAGT TTCTGTAAAA
GATATTCCCC GATTTATACA AGAAAGTAAA AAAATAGGTC AGCTTGCAGC AAAAAGCGCT
TTTCGCACTT GGGTAAGACA GCAAATCTCT GCGGCTCAAC CACCCGTACT TTAA
|
|---|
| Protein sequence | MVITQPPAET RTLLKNISWQ TFKAILADMG NERNSRFAYD RGIVEIMTPL MPHENFNRLI
EGFIIVLCEE FSLEVKSTGS LTLTRDDLEK GGEPDSSYYI QNEFLIRDKE NIDLAHDPPP
DLVLEVDYSR PKINKLSLYA SMAIPQFWKY NGTVLQIYSL SGNEYIEVEF SPTFVPVSVK
DIPRFIQESK KIGQLAAKSA FRTWVRQQIS AAQPPVL
|
|---|
| |