Gene Ava_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1875 
Symbol 
ID3681788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2327724 
End bp2328524 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content43% 
IMG OID637717216 
Producthypothetical protein 
Protein accessionYP_322392 
Protein GI75908096 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.631797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACTT TCTCTAACTA CGTCCCCCAA TCAGATCCGC CCCTTCCTCC GTGGGAAACC 
CTACCCACCA TGTATGATTT ACCTAGCGAC AATCCAGAGG AGCCAGGCTT GCCAGATGAA
TTTCACTTTT TACAGCCCTT ACTCTTATAC TTAACCTTTC AACCAATTAA CTGGAATCCT
GAATTAGTTT ATAGTGCGGC TGACCTCAAT CTTTATTACG ATCTTGATCA TCCACTGTGG
TATAAACGCC CTGATTGGTT CGGTGTTGTG GGAGTACAAA AACTTTATAA AGGCGAAGAT
TTGCGTTTAA GTTATGTCAC TTGGCAAGAA CCAGCAAATC CTTTCGTTGT GGTGGAATTA
TTATCTCCAG GTACAGAAGA TGAGGATTTA GGCATTACTC AAAACCCAAC AGCTAAACCA
CCCAGCAAAT GGGAAGTTTA TGAACGGATT TTGCGAATCC CTTACTATAT TGTGTTTAGT
CGCTACACCA ATGAACTGAG AGCTTTTCAA TTAGTAGGCG GTCATTATGA AGCGATAAAT
TTAACTGAAG GACGCGTACT CATGCCAGAG TTGGGTTTAA GTTTGGGTGT ATGGCAAGGA
GCGTTTCGAG ACATTAACAG GTTGTGGCTA CGTTGGTTCA CCTTAGCAGG GGAATTAATT
TCTGAGCCGA CAGAAGAAGC TATTGCAGCT ACAGAACGAG CGATAATTGC GGAACAAGAA
GCGGAACAGG CAAAAAGAAA AGCAGAACAA CTAGCAGAAC GCCTGCGACA ATTAGGAGTG
AATCCCGATG AGCTAGTGTA A
 
Protein sequence
MTTFSNYVPQ SDPPLPPWET LPTMYDLPSD NPEEPGLPDE FHFLQPLLLY LTFQPINWNP 
ELVYSAADLN LYYDLDHPLW YKRPDWFGVV GVQKLYKGED LRLSYVTWQE PANPFVVVEL
LSPGTEDEDL GITQNPTAKP PSKWEVYERI LRIPYYIVFS RYTNELRAFQ LVGGHYEAIN
LTEGRVLMPE LGLSLGVWQG AFRDINRLWL RWFTLAGELI SEPTEEAIAA TERAIIAEQE
AEQAKRKAEQ LAERLRQLGV NPDELV