Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1873 |
Symbol | |
ID | 3681786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2325804 |
End bp | 2326589 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637717214 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_322390 |
Protein GI | 75908094 |
COG category | [R] General function prediction only |
COG ID | [COG3889] Predicted solute binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.499146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTGTG GGTTTGGAAA ATCAAGTGCA ATAGTTGCTA CCGCTTGCGT AATTAGTACT AGTTTCGTAA TTTCAAATAC AACTTTTGCG GCTCGTCAGC GTAATTATAC GCCACAGGAA TTTCGTACAG TTTTACGAGG TTTAGGCTAT AATGTCAAGG TCACAAACAC GCCCCTCACT GACGCAGAAA CTAAAAAAGC TATCAGTGAA TTTCAAAAAG GTTACAAACT TACCCCAGTT GATGGAATCG CAGGACCAAA AACCCAAGAT TTTGCTGCAA ATATCGTTCA AATCTTGCAA GCAAACTTAA ATGCAGTCCT GAAAACAAAT CCCCCTTTAC CCCGTGATCA ATTTTACGGT CCTAAAACCG AAGCAGCCAT TAAAGAATTT CAGACAAAAC ATAAGCTAGA AGCAACTGGT ATTGCTAATT TAGCTCTCCG TCAAAAGTTA GACGAAGAAG CTAAAAAAGT CATCAGTCAA CCGAGTACTG AGCCAACAGC GAAGCCGTCA CCATCACCAA CATCTAAACC AACAACATCA CCGACAGCGA AGCCGTCACC ATCACCAACA TCTAAACCAA CAACATCACC GACAGCGAAG CCGTCACCAT CACCAACATC TAAACCAACA ACATCACCGA CAGCGAAGCC GTCACCATCA CCAACATCTA AACCAACAAC ATCACCAACA TCTAAACCGA CGGTATCACC TTCACCAACA GCTTCGCCGG CAACTACACC TACAACATCA CCCTCACCAA CAGCTTCGCC GACAACTACA CCTTAA
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Protein sequence | MWCGFGKSSA IVATACVIST SFVISNTTFA ARQRNYTPQE FRTVLRGLGY NVKVTNTPLT DAETKKAISE FQKGYKLTPV DGIAGPKTQD FAANIVQILQ ANLNAVLKTN PPLPRDQFYG PKTEAAIKEF QTKHKLEATG IANLALRQKL DEEAKKVISQ PSTEPTAKPS PSPTSKPTTS PTAKPSPSPT SKPTTSPTAK PSPSPTSKPT TSPTAKPSPS PTSKPTTSPT SKPTVSPSPT ASPATTPTTS PSPTASPTTT P
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