Gene Ava_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1873 
Symbol 
ID3681786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2325804 
End bp2326589 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content44% 
IMG OID637717214 
Productpeptidoglycan binding domain-containing protein 
Protein accessionYP_322390 
Protein GI75908094 
COG category[R] General function prediction only 
COG ID[COG3889] Predicted solute binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.499146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTGTG GGTTTGGAAA ATCAAGTGCA ATAGTTGCTA CCGCTTGCGT AATTAGTACT 
AGTTTCGTAA TTTCAAATAC AACTTTTGCG GCTCGTCAGC GTAATTATAC GCCACAGGAA
TTTCGTACAG TTTTACGAGG TTTAGGCTAT AATGTCAAGG TCACAAACAC GCCCCTCACT
GACGCAGAAA CTAAAAAAGC TATCAGTGAA TTTCAAAAAG GTTACAAACT TACCCCAGTT
GATGGAATCG CAGGACCAAA AACCCAAGAT TTTGCTGCAA ATATCGTTCA AATCTTGCAA
GCAAACTTAA ATGCAGTCCT GAAAACAAAT CCCCCTTTAC CCCGTGATCA ATTTTACGGT
CCTAAAACCG AAGCAGCCAT TAAAGAATTT CAGACAAAAC ATAAGCTAGA AGCAACTGGT
ATTGCTAATT TAGCTCTCCG TCAAAAGTTA GACGAAGAAG CTAAAAAAGT CATCAGTCAA
CCGAGTACTG AGCCAACAGC GAAGCCGTCA CCATCACCAA CATCTAAACC AACAACATCA
CCGACAGCGA AGCCGTCACC ATCACCAACA TCTAAACCAA CAACATCACC GACAGCGAAG
CCGTCACCAT CACCAACATC TAAACCAACA ACATCACCGA CAGCGAAGCC GTCACCATCA
CCAACATCTA AACCAACAAC ATCACCAACA TCTAAACCGA CGGTATCACC TTCACCAACA
GCTTCGCCGG CAACTACACC TACAACATCA CCCTCACCAA CAGCTTCGCC GACAACTACA
CCTTAA
 
Protein sequence
MWCGFGKSSA IVATACVIST SFVISNTTFA ARQRNYTPQE FRTVLRGLGY NVKVTNTPLT 
DAETKKAISE FQKGYKLTPV DGIAGPKTQD FAANIVQILQ ANLNAVLKTN PPLPRDQFYG
PKTEAAIKEF QTKHKLEATG IANLALRQKL DEEAKKVISQ PSTEPTAKPS PSPTSKPTTS
PTAKPSPSPT SKPTTSPTAK PSPSPTSKPT TSPTAKPSPS PTSKPTTSPT SKPTVSPSPT
ASPATTPTTS PSPTASPTTT P