Gene Ava_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1871 
Symbol 
ID3681823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2323459 
End bp2323920 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content45% 
IMG OID637717212 
Producthypothetical protein 
Protein accessionYP_322388 
Protein GI75908092 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.017158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCATC CTTTAGTTCC ACCAATTACA GATTTGGCAA TACCAGTGGC AGAACAACTG 
GGATTGGAAG TCGTTGGTAT CGTTTTTCAC ACCAACCAAC GACCACCAGT ATTACGTGTA
GATATCCGTA ATCCTCAACA GGATACTGGT CTGGATGATT GTGAGCGCAT GAGCCGTGCT
TTAGAAGCTG CCTTAGATGC AACGGAAATC ATTCCAGATG CTTATGTCTT GGAAGTGTCA
AGTCCTGGTA TTTCTCGGCA ACTGGTAACT GATCGGGAAT TTATCTCTTT TAAAGGGTTT
CCTGTAATTG TTTCCACTTC CCCACCCCAC GAAGGACAAC AAGAGTGGAT TGGTCAGTTG
ATTCGCCGGG ATGAGACAAA AGTTTACATA AATCAAAAAG GCCGCGTCAT TGAAATCCCT
CGCTCCCTAA TTACTAGGGT GTTGCTACAT GACGGCGAAT AG
 
Protein sequence
MTHPLVPPIT DLAIPVAEQL GLEVVGIVFH TNQRPPVLRV DIRNPQQDTG LDDCERMSRA 
LEAALDATEI IPDAYVLEVS SPGISRQLVT DREFISFKGF PVIVSTSPPH EGQQEWIGQL
IRRDETKVYI NQKGRVIEIP RSLITRVLLH DGE