Gene Ava_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1860 
Symbol 
ID3681812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2313465 
End bp2313992 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content45% 
IMG OID637717201 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_322377 
Protein GI75908081 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGATG AAGAATTAAA ACCAGTACCC GCAGCAGCAG AGGCTATAGT TCCATCTGGG 
CCGACTTCTC AGTGGCTAAC GGAAAATGGC TTTGCTCATG AATCCTTGGC GGCTGACAAA
AATGGTGTAG AGATAATTAA AGTGGAACCA GATTTTCTGC TTCCCATCGC TACAGCCCTG
TATGCTTACG GGTTTAATTA TCTTCAGTTT CAAGGCGGTA TTGATCTCGG CCCAGGACAG
GATTTAGTCA GTGTGTATCA CTTGGTGAAA GTGAGTGACA ACGCTGATAA GCCTGAAGAA
GTCAGAGTGA AGGTGTTTTT ACCACGGGAA AATCCTGTAG TACCTTCGGT TTACTGGATT
TGGAAAACCG CAGACTGGCA AGAACGCGAA TCTTACGATA TGTTCGGTAT TATCTACGAA
GGACACCCCA ATTTGAAACG CATTTTGATG CCAGAAGATT GGGTAGGTTG GCCTTTGCGG
AAGGATTACA TCTCGCCTGA TTTCTACGAG TTACAGGACG CTTATTAG
 
Protein sequence
MADEELKPVP AAAEAIVPSG PTSQWLTENG FAHESLAADK NGVEIIKVEP DFLLPIATAL 
YAYGFNYLQF QGGIDLGPGQ DLVSVYHLVK VSDNADKPEE VRVKVFLPRE NPVVPSVYWI
WKTADWQERE SYDMFGIIYE GHPNLKRILM PEDWVGWPLR KDYISPDFYE LQDAY